Pimephales promelas (fathead minnow): 120460278
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Entry
120460278 CDS
T08155
Symbol
tbc1d2b
Name
(RefSeq) TBC1 domain family member 2B
KO
K20166
TBC1 domain family member 2B
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120460278 (tbc1d2b)
Membrane trafficking [BR:
pprm04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120460278 (tbc1d2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
XLF_CC
DUF16
YwqH-like
PH_8
PH_6
SRRM_C
CtIP_N
Motif
Other DBs
NCBI-GeneID:
120460278
NCBI-ProteinID:
XP_039503898
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MHEEDDSAASPSRNSRILATKSLDVPECDAPKDQQSKLCGYLNKLTVKGPLRSFKTRWFV
YDPRKCYLYYFKTPQDALPMGHIEIADACFRYDVEVDEGLFEIHTEGKEFLLKAPNRQVM
HYWLQQLQQKRWEFCNMSGHRDSWCSPSPFHPHTGLVAKDAEAMLNEKPNDSMESVRNDF
ALEMDNDGLVGLQSSRNPVAQPTAALNSLRHWGSGLRNSMSHLRPGRGGENRRSVFYTAS
NEDWEMVDPPTKDAPDQKSPADGQRRESPSHFNRYSIGSAFTFDFRNPSRMKRPFHVGSG
KVNRSAESSPVECNGNKTSELQLYVQSQQEEINRLQEQENNLREELASQKELVCLLQQTL
RSSQCDWRSKVPPGNMEPHNHNEEETEVHKALTERDSQIKALCGHMERLALEKESLQQEL
KGLKIKIGEINEQLGMLMETIQAKDEVIMKLSQQSDEGGTQSAECNSPSATREQQELDSL
KDSLHGYKSQNKFLNKEILELTVLRRNAESREKLLEAKYNSLEAKMCQVESKYLVLLQEV
KTPVCSSSEKTYSGEVITRLLEDALQVESADQQEHTILKPNAVSEYDIFGFKTVPEEEDE
EEKLEAKKRALDLKSLSLTDQETSVRVKWDNYLAITMNREMVRSPELKALMRNGVPHIHR
SKVWIWCVSYHVKKIRDNQPKDYYQNLLCTANDKPNPACKQIELDLLRTLPNNKHYASPD
SDGIQKLRNVLLAFSWRNPDIGYCQGLNRLAAIALLYLDQEDAFWCLVAIVEVFMPRDYY
TKTLLGSQVDQRVFKDLMYEKLPRLHAHFEHYKVDFSLITFNWFLVVFVDSVVSDILFKI
WDAFLYEGPKIIFRFALALFKYKEEEFLKLQDPMTIFKYLRYFTRTILDARKLMSMAFVD
MNPFPLRQIQNRRTFHLEKVRLELTELEAIRQTFLRDRDTTLDGRTLISDDDEDS
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagaggatgacagcgctgccagtcccagcaggaactctcggatcctggcgacc
aagtccctcgatgtacccgaatgcgatgccccgaaggaccagcaatccaaattatgcggc
tacctgaataaactgacagtgaaagggcccctaagaagcttcaaaacgcgctggtttgtg
tacgaccccaggaaatgttatttgtattactttaagactcctcaagacgcccttccaatg
ggacacattgagatcgcggatgcctgtttcagatatgatgtagaggtcgacgaggggctt
tttgagatccacaccgaggggaaggagttcctactgaaggcacccaacaggcaggtgatg
cattactggctgcagcagttacagcagaaacgatgggagttctgtaacatgtctggtcac
agagacagctggtgctccccatccccgttccatccacatacgggcttggtggccaaagat
gcagaagcaatgctcaacgagaagcccaacgacagcatggaaagtgtccggaatgacttt
gctttggagatggacaatgatgggctggtcgggctccagtcatcacgtaaccctgtggca
caacccaccgcagctctcaactccctccgacactggggctctgggctcagaaatagcatg
tctcacctgcggcccggccgaggaggagagaacagacgcagtgtgttttacacagccagc
aatgaggactgggaaatggtggatcctccaaccaaggacgcaccggatcagaaatcccca
gcagacggccaacgccgggagagcccatctcactttaaccgatactccattggctcagcg
ttcacgtttgatttccgcaacccctcgagaatgaaacggccctttcacgtgggctctggc
aaagttaaccgcagcgccgagagctcgccggttgagtgtaatgggaacaagacctccgaa
ctgcagctctacgttcagagccaacaggaagagatcaaccggttgcaggagcaagagaac
aacctcagggaggaactcgccagtcagaaggagttggtttgtcttctccaacaaacgcta
cgtagctcccaatgcgattggcgttccaaagtgcctcctgggaacatggagccgcacaat
cataacgaagaagagactgaggtgcacaaagccctgacagagcgggacagccagatcaaa
gctctctgtggtcatatggagaggctagccttggagaaggagagtcttcaacaggagttg
aaaggtttgaagatcaaaatcggggagataaatgaacagctgggcatgctcatggagacc
attcaggccaaggacgaagtcatcatgaaactttcccagcagagtgacgaaggaggaacc
cagtcagctgaatgcaactcacctagtgcaactagggaacaacaagagttggacagcttg
aaggacagtcttcatggctacaaatcccaaaataaattcttgaacaaagaaattctcgag
ttgacagtcttacgaagaaatgctgaatccagagagaaactgctagaggcaaagtacaac
agtttggaggccaagatgtgtcaggtggagagcaagtacctggttcttctgcaggaagtg
aagactcctgtgtgctcctcttcagagaagacctatagtggagaggtcatcacccgctta
ctagaagatgcgctacaggtggagagcgctgaccagcaggagcacactatcctcaaaccc
aacgctgtcagtgaatatgacatttttggcttcaaaactgtcccggaggaggaagatgag
gaggaaaaacttgaagcgaaaaagagagcgctggacctgaagtctctctccctgacagac
caggagacatcagtcagagtgaagtgggacaactacctggccatcaccatgaacagagag
atggttcgatctccagagctgaaggcgctgatgcgaaacggggtgccccatatccaccgt
tccaaggtgtggatctggtgcgtgagctaccatgtgaagaagatccgtgacaaccagccg
aaggactattaccaaaaccttctgtgcacggcgaacgataaacccaacccggcctgcaag
caaatagagctcgatcttctgcggacgctcccaaacaacaagcactatgcctctcctgac
tcagatggcatccagaaactcaggaacgtgctactggctttttcttggaggaatccagat
atcggctactgtcaaggcctcaacaggctggcagctattgctcttctgtatttggaccaa
gaagatgctttctggtgtctcgtggccattgtggaggttttcatgccacgtgactattac
actaaaacactgctaggctcacaggtagatcagcgtgtgtttaaggacctgatgtacgag
aagttacccaggcttcatgctcattttgagcactataaggtagacttctctctcatcacc
ttcaactggttcctggttgtgtttgtggacagtgtggtcagtgacatcctcttcaagatc
tgggacgcttttctctatgagggacccaagataatattccgatttgctcttgcgctcttc
aagtacaaagaagaggaatttctaaagctccaggatcccatgaccattttcaagtacctt
cggtacttcacacgtaccatcttggatgcaaggaagttgatgagcatggcctttgtggac
atgaacccattcccactgaggcagatccagaaccgccgcacattccacctggagaaggtc
cgcctggagctgaccgagctggaagccatccgtcagaccttcctgcgggacagagacacc
accctggacggccgcaccctcatcagtgacgacgacgaggacagctga
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