Pimephales promelas (fathead minnow): 120460319
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Entry
120460319 CDS
T08155
Symbol
shank2b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2b isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
pprm
Pimephales promelas (fathead minnow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SAM_2
Ank_5
Ank_3
SH3_2
PDZ
SH3_9
PDZ_6
FERM_f0
SH3_1
CUB_M02D8_5_3rd
SAM_4
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
120460319
NCBI-ProteinID:
XP_039503973
LinkDB
All DBs
Position
Unknown
AA seq
1828 aa
AA seq
DB search
MPRSPMSSEEEMAQSFSDSASSESDSSRDEPPRLDRPTSGRLDNSLRDTTLICVVIPDLQ
QSKSMRFSPDATVWVAKQQILCTLTQSLRDVLNYGLFQPAVDGRESGFLEEERPLRDYPL
PSTKGVPTLEFRYKSRVYQQPNVNEKQIEKLHTQVNLRKFMEYIQHHQMDKVSKMLERGL
DPNYHDPDTGETPLTLAAHLDNMVEIIVTLKNGGAHLDFRSRDGMTALHKAARAKNQIAL
KTMLDLGASPDYKDRQGLTPLYHTVTVGGDPSCCEVLLRAHASVACHDENGWHEIHQACR
YGHVQHLEHLLFYGADMSVENASGNTALHICALYKQEKCARVLLVRGASKDVKNYRGQTP
FQVAIIAGNFELAESIKNHKDADIVPFREAPAGTGRSRPTQHQGRSTLAAPRVLLRSNSD
NNLNVNKPPLERSRSPSPVASPLRSLLPRHPQQMQNSPNGTVKTMALGGRSARSRSPSLG
RLGEGDTRRQTPQRHSSPRANRDAFSGMDTPGSKRKLYSAVPGRHYVVVKTYQPQAEGEI
ALFKNDRVKVLSIGEGGFWEGSARGNVGWFPAECVEEIPSKPNEDRPYARADRSERRKLF
RHYTVGSYDSFDASSDCVINEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPALQ
YLESVDEGGVAWKAGLRTGDFLIEVNQDNVVKVGHKQVVNMIRHGGNHLIIKVVTVSRNL
DPDDTARKKAPPPPRRAPSTALSMRSKSMTSELEDLVDKATLRKKKDDQLSDNEGLKKRI
VFQVTLNKVDEVVPPQKPMWDNSNTDLRVAAVKPRPTSKCFAVSPEMNSLCNSQDAAADS
PQQPGSPRGPFLGIPRGTIRRQTSIGVTEEEKQFLTPPMLKFTRSLSMPDTSEDIPPPPA
ISPPSPPHNNAPAPAGRGYGTIRPGFTSQSPNANSTAPDRGEGAGWRDQGMFYRDSPEQY
ESEGYNHSPTAQQSLHMRRALIPENPYSDVGKMGHAGLFVPNKPARRKGMLVKQPNVEDS
PEKTCSIPIPTIIIKEPSTSSSGKSSQGSSMEIETTTPDHPGQLRPEDGLNAGSPFAAAI
AGAVRDREKRLDAHRNSPSFKSTDAGDEDVAPRPAPRLRHSKSIDEGMFSSDERLRRLMA
PPSSLLSIPRGGGNVTDFNSPEPTMVRELLSTRTGHSPISLPAHKTYSSGSGNYVHPVTG
KPLDPNSPLALALAARDRAMREQSQPLPLKSDLSKLDLNKPLFIDTKLRPNVEVGFSSTA
TMGRPRGGLRRQMTESKYETESKYQLDLGKPEKRPEEKKNMLIDIVDTSQQKSAGLLMVH
TTDGAKSEDNSLSEGDRDEAVSPDNTPGELRDPNQPAPTNPPAPKALSAAPHGKTIITVS
SVDEPVKLPFGIPPPPLASVDIDEEFVFAEPLPPPLEFANSFDIPEDQAGTIAELLKQKA
NGTKGPSLAPYYPPLGGGISEIKRPTVLTNCTPPSFPPGPLEPYEQITDSGIEVDSRSSC
DPQLETTSNISTVSSISTLSSEGGETMDTCTVYADGQAFLVDRSQILSKPKPKPAIKSNA
LYKDALPEENVSSFRMPSSVPPPPPGSIPPEPLKTPTQRTSKLWGDPPEMKGPHGPEANS
VLQHVNKDKAPKSGEALDSPMGSRTHFGTRNQDGVSLISGTQQNTTVTFTAQPGPNVPAP
SPCRQPDSLPSHHHTPSPIMSPPDSGLSCASSLPTSVTSPTMTDVFGLPTPPLSLGTGRS
RSPSPLTLIQAASNKPFASKPVLMWSKQDVADWLESLNLGEHRDAFMDNDIEGSHLPNLQ
KEDLIDLGVTRVGHRMNIERALKVLLDR
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggagccccatgtctagcgaggaggaaatggctcagagtttctctgactcggcc
agctcggaatcagacagttcccgagatgagcctcccaggctggatcgacctaccagtggc
cgactggacaacagcctgcgagacacaacgctcatctgtgtggtcatccctgacctgcag
cagtccaaatccatgaggttcagtcctgatgccacagtatgggttgctaagcagcagatc
ctgtgtacactcacacagagtctgagagatgtgctcaactacgggctcttccagccggcc
gtggacgggagggaaagtggtttcctggaggaagaacgacccctcagagactatccgcta
ccctccactaaaggcgttccgaccctcgagttccgctacaagagcagagtgtaccagcag
ccaaacgtcaatgaaaagcaaatcgaaaaactccacacacaggtcaacctgaggaaattc
atggaatacatccaacatcatcagatggacaaagtttccaagatgttggagagagggctg
gaccccaactatcatgacccggacactggtgagacaccactaacccttgctgcccacctg
gacaatatggtggagattatcgttacattgaaaaacggcggggctcatttggatttccgc
tctcgggatgggatgactgccctgcacaaagcagccagggcaaagaaccagatagctctc
aagactatgttggatttgggagcgtctccagactataaggaccgtcagggtttgacacca
ctctaccatacagtgaccgtaggtggagacccgagctgctgcgaggtcctgttgcgtgcc
catgccagcgtcgcatgccatgatgagaacggctggcacgagatccaccaggcttgtcga
tacggtcacgtccagcacctggagcacctcttgttctacggagcggacatgagtgtggaa
aatgcttctgggaatacagctctccatatttgcgccctgtacaaacaggaaaagtgtgcc
agggttcttctggttcgtggagccagcaaagacgtcaagaactacagaggacaaacgccc
tttcaggtggcaataattgctggaaattttgagcttgcagagtccataaagaatcacaaa
gacgctgatattgtgccgttccgggaggcaccggcaggcacgggtcggagcagaccaacc
cagcaccagggtaggagcacacttgccgccccgcgtgtgctgctccgctcaaacagcgac
aacaacctgaacgtcaacaagccaccgttggaacgttctcgctcaccctctcctgtcgcc
tcccccctgcgcagcctcttgccccgccacccccagcagatgcagaacagccccaatggc
acggtgaagaccatggccctggggggacgctccgcccgaagccgttccccttccctgggc
cgactgggggagggagacacgcggagacagaccccgcagcgccacagcagtccccgtgcc
aacagggatgccttttccggcatggacaccccagggtccaaacgcaagctgtacagtgct
gtgcctggaagacattatgtggtggtcaagacttaccaaccacaggccgagggcgaaata
gctttgttcaagaacgacagggtgaaagttctcagtattggagaaggaggattctgggaa
ggcagtgcccgagggaatgtaggctggttcccagcagaatgtgtggaagagatcccaagc
aaacccaatgaggacaggccatatgcccgggcggaccgatcagagagaaggaagctcttc
cgacactacactgtgggatcttatgacagttttgatgcatcaagcgactgcgttatcaac
gaaaagacggtcgtgctgcagaagaaggataacgagggattcgggttcgttttgagaggg
gcgaaagcggatacccccatcgaggagtttactccaaccccggcgttccctgctttgcag
tatctggagtcagtggatgagggaggggtggcatggaaagctggcctgaggactggcgac
ttcctcattgaggtgaaccaggacaatgttgtcaaagtgggccacaaacaagtggtcaac
atgattcgtcacggcggcaaccacttaatcatcaaagtggtgacagtcagtcgaaaccta
gaccctgatgacacggctcgaaagaaagcaccaccaccaccacggagggctccctccaca
gccttgtccatgcgttcaaaatctatgacctcagagctagaagacctagtggataaagcc
actttgaggaaaaagaaggatgatcagctttcagataatgagggtctgaagaagaggatt
gtatttcaagtcacactaaataaagtggatgaggtcgtacccccccagaaaccaatgtgg
gacaactcaaacacagatctgagggtggcagcagtcaaaccacgcccaactagcaagtgt
tttgctgtcagccctgaaatgaattctctctgcaatagtcaggatgcagcagcagactca
ccacaacaaccagggagtcctagaggccctttcctgggtataccaaggggaaccatacgg
cggcaaacatctataggggtaaccgaagaagagaagcagttccttactcctccaatgttg
aaatttacaagaagcctttcaatgcctgacacatcagaggatattccacccccaccagcc
atctcccctccatctccacctcataataatgctcccgccccagctggtcgaggatacggc
accatcagaccaggctttacttcacagagtcctaatgcaaacagcacagccccagacaga
ggtgaaggtgctgggtggagagatcagggcatgttttacagagacagtcctgagcagtat
gaatccgaggggtacaatcatagcccaacagcccaacagagtcttcatatgcgccgtgca
ctaatccctgagaacccttactcggatgtgggcaagatgggtcatgctggactgtttgtg
cccaacaagcctgccagaaggaagggaatgcttgtcaaacaacccaatgtagaagacagt
cctgagaaaacctgctccattccaattcctacaataataatcaaagagccctccaccagc
agcagtggtaagagcagtcaagggagtagcatggaaattgaaacaaccacaccggatcac
ccagggcaactgcgtcctgaagatggcttaaatgcaggcagtccctttgcagctgccatt
gccggtgcagtcagagacagggagaagaggcttgatgctcatcgcaactctccatcattt
aagtccacagatgcgggtgatgaggatgtggcacctagaccggctccacgtctcagacac
tccaaatctatagatgagggcatgtttagcagtgatgagcgactgcgtaggcttatggca
cctccctcatcactacttagcatccctaggggtggaggcaatgtgacagacttcaacagc
cctgagcccaccatggtaagagaactgttgagcactcgtacaggacacagcccgatcagt
ctacctgctcataagacctacagctcaggaagtgggaattatgttcatccggtaacaggc
aaaccacttgaccccaattcaccattagctttagcgttagcagccagagaccgagccatg
agggagcaatcacagcctcttccgctaaagagtgacctatccaaacttgatcttaataag
ccgcttttcatcgacaccaaacttagaccaaatgtggaggttggcttctcaagtaccgct
accatgggccgtccccgtgggggtctgcgaaggcagatgacagagtccaaatatgagaca
gaatccaagtatcagctcgatctgggcaagcctgagaagaggcctgaggagaagaagaac
atgctgattgacattgtggacacttctcagcaaaaatcagctggtctgctgatggtacac
accacagatggggcaaaatcggaggataacagcttgtcagagggcgacagggacgaggca
gtgagtcccgacaacacccctggggagcttcgcgaccccaaccagccagctcccaccaac
cccccagctcccaaggcgctatcagctgctccacatggcaagaccatcataactgttagc
tcagtggatgagcctgtcaagttgcccttcggcatccctccacctcccttggcctctgtc
gacattgatgaagagtttgtgtttgctgaacccctcccaccccctctcgagtttgccaac
agttttgacattcctgaagaccaggcggggactatagctgaactgctcaaacagaaagca
aatggtacaaaagggccttctcttgctccctactatcccccattaggtggtggaatttct
gaaatcaaaagaccaacggtccttacaaactgcacacctcctagcttccctcctgggcca
ctagagccctacgaacaaatcactgactcgggcatcgaggttgacagccggagcagctgt
gacccccaactggagaccaccagcaacatctctactgtgtccagcatctccaccttgtct
tcggaaggaggtgagaccatggacacgtgcaccgtctatgcagatggacaagcctttctg
gtggacaggtctcagatcctgtccaaaccaaaacctaaacctgccatcaagagcaatgca
ctttacaaggatgctttgccagaggagaacgtgagctctttcagaatgccctcctctgtc
ccacctccgccccctggatctattccaccagaacccttgaaaaccccaacacaacgaacc
tcaaagttgtggggtgaccctccggagatgaaaggcccccatggccctgaagccaattca
gttctgcagcatgttaataaggacaaagcaccaaagtcaggggaagcattagactctcca
atgggatccaggactcacttcggaacaagaaatcaggatggtgtatccctcatctcaggt
acacagcagaacaccaccgttaccttcactgcccagcctggccccaacgtgcctgccccg
tcaccgtgccgacagcccgacagcctgccttcccaccaccacaccccgagccctatcatg
tctccgccagactctggtctcagctgtgcctcttccctcccaacctcggtcacttccccc
accatgacggatgtctttggcctgcccacaccacccctcagcctaggcacggggcgtagc
cgctccccttccccgctcaccctcatccaggcagcgtcgaacaagcccttcgcctccaaa
cccgtcctcatgtggagcaagcaggatgtggctgactggctcgagagcctgaacctgggc
gagcacagggacgcctttatggacaacgatatcgagggcagccacctgcccaacctgcaa
aaggaggatctgatcgatttgggcgtgacccgtgtgggtcaccgaatgaacatcgagcgg
gcactgaaagtcctcttagacagatga
DBGET
integrated database retrieval system
