Pimephales promelas (fathead minnow): 120460377
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Entry
120460377 CDS
T08155
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 20-like
KO
K09609
a disintegrin and metalloproteinase with thrombospondin motifs 20 [EC:3.4.24.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120460377
Peptidases and inhibitors [BR:
pprm01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
120460377
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
GON
TSP_1
ADAMTS_spacer1
Reprolysin
TSP1_spondin
Pep_M12B_propep
ADAMTS_CR_2
TSP1_CCN
Reprolysin_5
Reprolysin_3
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
120460377
NCBI-ProteinID:
XP_039504055
LinkDB
All DBs
Position
Unknown
AA seq
1873 aa
AA seq
DB search
MRGPALRLLGLVWHLSALLRTAHTYKLHHKQESFIRQLSSYEIVTPVRLNDFGESFPHRQ
HYRRRRRSADAEISRAHYRIEAFGQAFHLNLTADSGFIAPAYTVLHLGDEEKRGDDLRHC
FFRGHVNARSEHHAVFSLCTGLIGTFTTHSGQVFMEPLLSADEDEYEEEHNKPHLVYRHA
DTGSHDTQPCTSSEHHDNDHISLHSNRTLEEEVMSIQETMRKRSARSREDSSAPRSRKKR
FLSYPRFVELMVMADTKMLRHHGPNLEHYILTIMSVVAAIYRDPSVGNLINIMIVKLIVI
HNEQEGPNINFYATATLHNFCTWQQSHNVLDDSHPGHHDTALLITRQDICRAKDKCDTLG
LAELGTMCDPYRSCSISEENGLSTSFTIAHELGHVFNMPHDDSPKCRENGVKHQFHVMAP
ILNYDTSPWSWSKCSRKHVTDFLDTGYGECLLDEPSGRMYNLPNQLPGQVYNANRQCELM
FGPGYQVCPFMKQCKRLWCTSAEGNVGCRTQHMPLADGTECGNGMHCRHGMCVNKEMDMK
PVHGEWGPWGPYSVCSRTCGGGTRSTTRDCNKPEPRNGGRFCVGRRMRFRSCQTDPCPRG
PRDFREEQCAQFDGKHFNINGLPPTVRWVPKYSGILMKDRCKLFCRVTGTIAYYQLRDRV
VDGTPCGPDTYDICVQGLCRQAGCDHILNSKARNDKCGVCGGDNSSCKTIAGTFNNAQYG
YNVVVQIPAGATNIDIKQVSYSGSPEDDNYLALSDSQSNFLLNGNFVVSMFKREISFKGA
EIEYSGSNTTVERINCTQRIEEELVLQVLCVGNLYNPDVRYSFSIPIEEQREQFGWDPAG
PWQECSRMCQGERRQKAVCVRKSDHLVVSDQRCEYLPRPRGATENCNSDCELRWHVAGRS
DCSSKCGPGSRTLDVLCMRYSQSKSLSERVESRACADLPKPQTREACHGDCLLKSWQYSA
WSQCSRSCGRGVRTRQAFCMNNLGRRLAERECDDQRVVSEPCSDVPCPDWSASPWSECLA
TCGKGVRHRQVQCILGDEQLSEQRCDPNTKPSALGVCERPECASWQTGGWSPCTVSCGQG
YQMRAVRCVSGAYRETLDDRECNAAARPRDSQDCELSVCPRSASVFNTPRPAEPGQRHTQ
WRYGSWTTCSVSCGEGRRERYVSCRDAQGGVAEDSSCSLLPRPADSTVCFSPCGQWRDGE
WTPCSVSCGVGRSTRRVVCMNHHHQVDDSFCAPDERPSTEQECVSAPCQSSYHWPNNQPY
FPPDPGSHSWNVPAENQWRTGPWGACSSTCEGGSQRRVVVCQDADGRSTNHCDERVKPDQ
SKSCNSGPCPHWNYGVWGECTSSCGGGLRTRLVVCQRLNGQRLSEQNCDILEKPLDVEQC
NGQPCPGSLWLRRPWKPCSVSCGKGIKERQIVCVDQNQTQMEDEACAHQNRPRTQKACRA
GPCPRWRANQWRACSVSCGAGVQSREVFCRLKVRGQVRDDLCDERVRPVSIRPCFLAGCH
THSWMAHEWRDCNATCGRGMRSRSVICLDGGMSVVPDHLCDVSAKPHTYEPCHSATCQHV
WVTAAWSQCSVSCGSGLQRRAVRCSAVTSDLQLTSDLQSFSQCSERRPIDSRPCRLPACP
SAGAWSAGPWSQCSQTCGAGVMRRKVECVGAETCSSSSRPESSATCRQADCEHHSSCRQL
QVKGGVRRDGEHHITVRSKILRVYCAEMHSAFPKEYVTLRSGQTDNYSEVYGYRLQNPFE
CPYNGSRRQDCECRNDYASAGYTVFQRVRLHLPTLRIITADVRFSQTLFGRAVPFASAGD
CYSAAKCPQGQFSINLSGTGLKVAESTKWVSQGNYVTLKVHRSEDGSRIYGRCGGFCGKC
LPHPHTGLSVEIQ
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atgcggggtcctgcgctccggctgctgggactcgtgtggcacctctccgcgcttttacgc
accgcgcacacgtacaaactccaccacaaacaagagagcttcatcagacagctgtcgtcg
tatgagatcgtcactccagtgcgcttgaatgattttggcgagtcgttcccgcaccgacag
cattaccgcaggagaaggcgtagcgctgacgcggagatctccagggctcattaccggatc
gaggcgttcggtcaggcctttcacctcaacctgaccgccgattcgggattcatcgctccg
gcctacacggtgctccatctgggagacgaggagaagcgcggagacgacctgcgccactgt
ttcttcagaggacacgtcaacgcccgcagcgaacaccacgccgtcttcagcctctgcacg
ggactaatcggcacgttcacgacacacagcggtcaggtgttcatggagccgctgctgagc
gctgatgaagacgagtatgaggaagagcacaacaaacctcacctggtctacagacacgca
gacaccgggtcacatgacacgcagccctgcacctcctcagaacatcacgacaacgatcac
atcagtctccatagcaacagaactctggaagaggaagtgatgtcgatacaggaaacgatg
cggaagcgctcggctcgttcccgagaggattccagcgctccccgttcacgcaagaagcgt
ttcctatcgtacccgcgcttcgtggagctcatggtcatggccgacaccaagatgctccgg
caccacggcccaaacctcgagcactacatactcacaatcatgtcagtagttgctgccatc
tacagagaccccagtgtaggaaacctaatcaacatcatgattgtcaaactcatcgtcata
cataatgaacaggaaggaccgaatataaacttctatgccactgcgacacttcataacttc
tgcacgtggcaacaaagccacaatgttttggacgacagtcacccaggtcatcatgacacg
gcccttctcataaccaggcaggacatctgtcgggcaaaagacaagtgtgacacgttaggt
ttggcggagctgggaacgatgtgcgacccgtaccggagctgctccatcagcgaggagaac
ggcctgagcacttccttcaccatcgctcacgagctgggacacgtgttcaacatgccgcat
gacgacagtccgaagtgcagagagaacggagtaaaacaccagttccacgtcatggctcct
atcctcaactacgacaccagcccctggtcctggtccaaatgcagccgcaaacacgtcaca
gacttcctggacaccggttatggtgaatgtctcctggacgaaccctcaggccggatgtat
aaccttcccaaccagctgccaggtcaagtctacaatgccaaccggcagtgtgaactcatg
ttcggtcccggctaccaagtctgtccgttcatgaaacagtgcaagcgtctctggtgcacc
agtgcggagggcaatgtcggatgtcgaacgcaacacatgcctctcgctgatgggaccgaa
tgtggcaatggcatgcactgcaggcacggcatgtgtgtgaataaggagatggacatgaag
ccggttcatggtgagtggggcccctgggggccgtacagtgtgtgctccagaacctgtgga
ggagggactcgcagcacaaccagagactgcaataaacctgagccgaggaacggagggcgt
ttctgtgtgggccgcaggatgaggttccgctcgtgtcagacggatccgtgtccccggggc
ccgagggacttcagggaagagcagtgcgcgcagttcgacgggaaacacttcaacatcaac
ggactcccgccaaccgtccgctgggtgccgaagtacagcggcattctgatgaaagatcgc
tgtaaacttttctgtcgtgtcacggggacgatagcatactatcagctgagggatcgagtc
gttgatggaacaccgtgtggaccagacacatatgacatctgtgtacaaggcctctgtcgg
caagcaggttgtgaccacattttgaactcaaaggcaagaaatgataagtgtggtgtctgt
ggaggagacaactcatcatgtaagacaatcgctggaaccttcaacaacgcacaatatggt
tataacgttgtggttcagattcctgctggtgcgaccaacatagatataaagcaggtcagc
tactcaggatcaccagaagatgataactacctcgctctgtctgacagtcagtccaacttt
ctcctcaacgggaactttgtggtgtccatgtttaaaagggaaatcagctttaagggagca
gagattgagtacagcggatccaacaccacagtagaacggatcaactgcacacaacggatt
gaggaggagcttgtgctgcaggttctgtgtgtgggaaacctgtataatcctgacgtcaga
tattccttcagtattcccatcgaggagcagcgggagcagttcggctgggatccggcgggc
ccgtggcaggagtgcagtcgcatgtgtcaaggtgagcggcgacagaaggcggtgtgtgtt
cgtaagagcgatcacctggtggtttcggatcagaggtgtgagtatcttcctcgacccaga
ggagcgacagagaactgcaatagcgactgcgaactcaggtggcacgtggcgggccgcagc
gactgctccagtaagtgtggtccgggctcccgtacgctggacgtgttgtgtatgcgctac
agtcagagcaagagtctgagtgagcgtgtggagagccgtgcctgcgcagacctgcccaaa
ccacagactcgagaggcctgtcacggagactgtctgctcaagagctggcaatacagcgcc
tggtctcagtgctcgaggagctgtggacgaggcgttcggacgagacaggcgttctgtatg
aacaatctgggccggcggctggcggagcgagagtgtgatgatcagagagtcgtgagtgaa
ccctgcagtgacgtgccctgtcccgactggagcgcaagcccgtggagtgagtgtctggcg
acgtgtgggaagggcgtgcgacaccggcaggtgcagtgcattctgggagacgagcagctg
agtgagcagcgctgtgacccgaacaccaaaccctcggcgctgggcgtctgtgagcgtccc
gaatgtgcgtcctggcagaccggaggctggagtccgtgtacggtgagctgtggtcagggc
tatcagatgcgtgcggtgaggtgtgtgtcgggagcgtaccgtgagacgctggacgacagg
gagtgtaacgcggccgccagacctcgagacagtcaggactgtgagttgtcggtttgtcct
cgctcagcatcagtgtttaacacaccaagaccagcagaaccgggtcaacggcacacacag
tggagatacgggtcatggacgacttgctccgtgtcgtgtggcgagggccggcgtgagcgt
tacgtcagctgtagagatgctcagggtggagttgctgaagactcgtcctgttctctcctg
cctcgacccgcagactctactgtgtgtttcagtccttgtggacagtggagggacggagag
tggacaccgtgttcggtgtcgtgtggtgtgggtcggtccacgcggcgggttgtgtgtatg
aaccatcaccatcaggtggacgattcgttctgtgcgccggacgagcgtcccagcactgag
caggagtgtgtgtcagcgccctgccaatcctcctaccactggcccaacaaccagccctac
tttccccccgaccccggcagccacagctggaacgtccccgcagagaaccagtggaggacc
ggcccgtggggagcgtgttccagcacgtgtgaaggcggatctcagcgacgggtcgtggtc
tgtcaggacgctgatggccgaagcaccaatcactgcgatgagagggtcaaacccgaccaa
tcgaagagctgcaactcgggaccctgtcctcactggaactacggcgtctggggagagtgc
acgagctcgtgtggtggcggtttgcggactcgactggtggtttgccagcgtctgaacggt
cagcgattgagcgagcagaattgtgatattctggagaaacctctggatgtggagcagtgc
aacggccagccctgtcccggctcgctgtggctcagacgcccgtggaagccgtgttcggtg
tcctgtgggaagggaataaaagagcgacagatcgtgtgtgtggaccagaatcagacccag
atggaggacgaggcctgcgcacatcagaaccggcccagaacacagaaggcctgcagggcg
ggaccctgccccagatggagagccaatcagtggagagcgtgttcggtgagctgtggcgct
ggcgttcagtcccgcgaggtcttctgcaggttaaaggtcagaggtcaggtcagggatgac
ctgtgtgacgagcgtgtgcgtcccgtgtcaatccgcccctgcttcctcgccgggtgtcac
acacacagctggatggctcatgagtggcgggactgtaacgccacctgtggacgaggcatg
aggtcgaggtcagtgatttgtctggacggagggatgagcgtggttcctgatcatttgtgt
gacgtctcagccaaacctcacacatacgagccttgtcacagcgccacctgtcagcacgtg
tgggtcactgcagcctggagtcagtgttcggtgagctgcggctctggactccagcgccgg
gcggttcgttgctctgccgtgacctctgacctccagctgacgtctgacctgcagtcattc
tctcagtgtagcgagcgccggccgatcgacagcagaccctgtcgactcccagcctgtcca
tcagctggagcctggagcgccggcccctggagtcagtgctctcagacgtgcggcgctgga
gtaatgcggaggaaggtggagtgtgtcggcgctgagacctgctcatcgtccagccggccc
gagtccagcgccacctgcaggcaggccgactgtgaacaccactccagctgccggcagctc
caggtgaagggaggcgtcaggagagacggagaacatcacatcacagttcgctccaagatc
ctgcgcgtttattgtgccgagatgcacagcgctttcccgaaggagtacgtgacgctgcgc
agcggccagaccgacaactactcagaggtgtacgggtacaggctccagaacccgttcgag
tgcccgtataacggcagccgtcggcaggactgcgagtgcaggaacgactacgcttcggcc
ggttacaccgtgttccagcgcgtgcggctccatctgcccaccctgcgcatcatcacggct
gatgtgaggttcagtcagacgctgtttggtcgcgcggtgccgttcgcgtccgctggagac
tgttacagcgccgctaaatgtcctcagggtcagttcagcataaatctcagtggaacggga
ctgaaggtcgcagaatccactaaatgggtttctcaaggcaactacgtcacactcaaagtt
caccgctcagaggacggcagcagaatctacgggcgctgcgggggcttctgtgggaaatgt
cttcctcatcctcatactggactttctgtcgaaatccagtga
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integrated database retrieval system
