Pimephales promelas (fathead minnow): 120460401
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Entry
120460401 CDS
T08155
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03320
PPAR signaling pathway
pprm04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120460401 (pparab)
03320 PPAR signaling pathway
120460401 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120460401 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprm03310
]
120460401 (pparab)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120460401 (pparab)
Nuclear receptors [BR:
pprm03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
120460401 (pparab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120460401
NCBI-ProteinID:
XP_039504102
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MVDMENQYSAPSPLNDAVLDSPLCRDFIGGMGDLQDISQSMDEDALSSFEVTENQSSGLG
SGSESSTALDALTPASSPSSCVYGGPAGPEEFTSTSLNLECRVCSDRASGYHYGVHACEG
CKGFFRRTIRLKLEYDKCERRCKIQKRNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQSEK
LRLKAEILTGEREVEDPQQADQKTLAKQIYEAYMKNFNMNKCKARTILTGKTSTPPFVIH
DMETLQLAEQTFVAKMVGSSGGLLNKDAEVRIFHCCQCTSVETVTELTEFAKSVPGFSDL
DLNDQVTLLKYGVHEALFAMLASCMNKDGLLVAYGSGFITREFLKSLRRPFSEMMEPKFQ
FAMKFNSLELDDSDLALFVAAIICCGDRPGLVNVPHIERMQETIVNVLHLHLRSNHPDHG
FLFPKLLQKLVDLRQLVTEHAQLVQEIKKMEDTSLHPLLQEIYRDMY
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggtagacatggagaaccagtacagcgccccgtcgccactgaacgacgcagtgctggac
agcccgttgtgcagggacttcattgggggaatgggggaccttcaggacatctctcagtcc
atggatgaagacgctctcagcagcttcgaggtgaccgagaaccagtcgtcgggtctgggc
tccggatcggagagctccactgcgttagacgccctgactcctgcgtccagcccgtcatca
tgtgtgtacggtggcccggcgggaccagaagagttcacctccacctctctgaacctggag
tgccgcgtgtgctcggaccgcgcgtcaggataccactatggagttcacgcgtgtgaaggc
tgcaagggtttcttccgtcggaccattcgcctcaaactggagtatgacaagtgtgaacgc
cgctgtaagatccaaaagaggaaccgaaacaagtgccaatactgtcgctttcagaagtgc
ctgtctgtgggcatgtcccacaatgcgatccgctttgggcgaatgccacagtcggagaag
ctaaggttgaaggcagagattttgacgggagaacgagaggtcgaggacccgcagcaagcc
gatcaaaaaaccctggccaagcagatctacgaggcctacatgaagaacttcaacatgaac
aaatgcaaagcacggaccatcttgacgggcaagacgagcacgccgccttttgtgatccac
gacatggagacgctgcagttggctgagcagacgttcgtggcgaagatggtgggctcttct
ggagggctgctgaataaggacgccgaggtccggatatttcactgctgccagtgcacctcg
gtggagacggtgactgagctgacggagttcgccaaatccgtgccaggcttctcagacctg
gacctcaatgaccaggtgacattattaaagtacggtgtccatgaggccctgtttgccatg
ttggcgtcatgcatgaataaagacggtttgctggtggcgtacgggagcgggttcatcacc
agagagtttctgaagagcttacggcgaccgttcagcgagatgatggagcccaagtttcag
ttcgccatgaagttcaactccctcgagctggacgacagtgacctcgcgctgttcgttgct
gctatcatctgctgtggagatcggccaggcctggtgaacgtcccgcatatcgagcgaatg
caggagaccatcgttaacgtgcttcatctgcatctgaggagcaaccaccccgatcacggc
ttcctcttccccaaactcctccagaaactcgtggaccttcggcagctggtgacggagcac
gctcagttagtgcaggagatcaagaagatggaggacacgtcactgcatcccttactgcag
gagatctacagagacatgtactga
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