Pimephales promelas (fathead minnow): 120460497
Help
Entry
120460497 CDS
T08155
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pprm00535
]
120460497 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pprm00537
]
120460497 (gpc6a)
Proteoglycans [BR:
pprm00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
120460497 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pprm00537
]
Others
120460497 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glypican
Fz
MRP-S23
Motif
Other DBs
NCBI-GeneID:
120460497
NCBI-ProteinID:
XP_039504224
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MWKTPVVVFTSLSLLLSLSCAGDVKSRSCSDVRQAFTTKGFSLHNVPHQEIQGEHLRVCS
QGYTCCTSDMEDRLGQQSKADFERLVDGSSHTIRTVFTSRHKKFDEFFLELLDNSEKSLN
DMFVRTYGKLYTHNSEMFEDLFSELKRYYTGGNVNLEEVLNDFWSRLLERMFQLLNSQYT
FTDDYLECISKYTDQLKPFGDVPRKLKAQVTKAFIAARSFVQGLMVGREVANRVAKVNIS
PGCSKALTKMLFCPYCGGMPGLRPCANYCQNVMRGCLANQADLDPEWNLFIDAMLLVADR
LAGPFNIEAVMDPIDVKISEAIMAMQDNSIQVSTKVFQGCGHPKPAGMGRSARGISDVFN
SRFRPYSPEERPTTAAGTSLDRLRIVWRTMQHSVIDIKDKLRESKRFWSSLPDSICAEDT
VTDPDEEQCWNSHTKGRYFPEVVKDGLTNQLNNPEVEVDITRPDTFIRQQIMTLRVMTNK
LRNAYNGKDVYFQDSSDEESGSGSGSGFTTEPEVIHTEPPMLEADKSDPQPTAGAAHRHK
PSLQLLASVLALTALVLCWR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagacacctgtcgtggttttcacttctttatcgcttctattgtcgctgtcgtgt
gctggagatgtaaaatcgcgcagctgcagcgatgtgcgccaggcgttcacgaccaaaggc
ttcagtctccacaatgtgccacatcaggagatacaaggtgaacatctgcgggtttgttcc
cagggctacacctgctgcacttcagacatggaggaccggctcggccagcagagcaaggcg
gatttcgagagactagtggacgggagcagtcacaccatacggacagtatttacctccaga
cataaaaagtttgacgaattctttctggagttgctggacaactcggaaaagtctctgaac
gacatgttcgtgcgcacatacggcaaactgtacacacacaactctgagatgttcgaggac
ctgttctccgagctcaagcgctactacaccgggggaaacgtgaacctcgaggaggttctg
aatgacttctggtcgagacttctggagcgcatgtttcagctgctgaactctcagtacacc
ttcactgacgactatctggagtgtatcagcaaatacaccgaccagttgaaaccctttgga
gatgttccacgcaagctcaaggcccaggtcaccaaggcctttatcgcggctcgatcgttc
gtccaaggactcatggtgggccgggaagtggccaacagagtggcgaaggtcaatatatct
ccaggatgcagtaaagcattgaccaaaatgttgttctgtccatattgtggaggaatgcca
ggcctcagaccctgtgccaactactgccagaatgtgatgcgaggctgcctggccaaccaa
gccgacctggacccggagtggaacctctttatcgatgccatgctgctggtggctgacaga
ctcgcagggccctttaacatcgaggccgtcatggacccgatagatgtaaagatctctgag
gccatcatggccatgcaggacaacagcatacaagtttcaaccaaggtatttcaaggatgc
ggtcatcccaaaccagctggaatgggccgatctgcccgcgggatctcggatgtgttcaac
agtcgcttcagaccgtacagcccagaagagagacccaccacggcagccggcaccagcctg
gacagactgaggattgtctggaggacgatgcaacacagcgtgatcgacattaaggacaag
ctaagggagtcgaagagattctggtcgtcgctgccagacagcatctgtgccgaggacacg
gtgactgacccagatgaggagcagtgctggaacagccacacaaagggaagatattttcct
gaagtcgttaaagacggccttacgaaccagctcaataacccagaggtggaagtggacatc
acgagacccgacaccttcatcagacagcagatcatgaccctgagagtgatgaccaacaag
ctacgaaacgcctacaacggcaaagacgtctactttcaagactcaagtgacgaggagagc
ggctcgggcagcggaagtggcttcacgacagaacctgaagtgatccacacggagcccccg
atgttggaagcagacaaaagcgacccgcaaccaacggcaggcgcagcccatcggcacaag
ccttcgctgcagttactagcgtctgtcctggccctcacagcactggtcctgtgctggaga
taa
DBGET
integrated database retrieval system
