Pimephales promelas (fathead minnow): 120460510
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Entry
120460510 CDS
T08155
Symbol
slitrk6
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120460510 (slitrk6)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRR_LRWD1
LapA_dom
DUF6984
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120460510
NCBI-ProteinID:
XP_039504252
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MLARIVFVCSFFAGATFGDTESKVLYDGACKSLCTCEETDGQLYINCEESNISKMSDVEV
PSDKPFHLNLYKNDLVELLATDMDAFKNVVTLHLGENSIQELEPGVFSALGSLRKLHINR
NYLVMLKEDTFHGLVNLEYLQADTNFIRVVEPGAFSKLVRLKVLILNDNEIEFLPSNIFR
FVPLTHLDLRGNKLQTLPYVGFLEHIGRIIELQLEENDWVCNCEILHLKVWIENMRAQSS
IGEVVCNRPEDLRGTSLARVKRDLLCPSHADINLEEPSKSLDMVVTPSTKVVQIPNAKDD
AKIPTPANGLGPCVIVGFLMHCEDRGIQRISDLGILEQSPTMLVLTGNMIQRLFKYDFVT
YDGLELLNLANNQIDYIDNETFLSLSNLKKLYLNGNRIEKISATMFLGLHNLENLYLEYN
LIKEIEPGSFNPLTNLKLLYLNNNRLNTLPAQIFRNVPLVTLNLRKNLFTHLPVSNALDQ
LGNLKQIYLEDNPWDCTCDLVSLKQWVEKRSKETVVGAILCHTPKKLSTAEVRNLKHDVL
CPGLVTYNSLLGGTEDGIPVTTAPEGGTSGFFRSITDAVPLSVLILCLLILFLTVIFCAA
GIVVFVLHRQRRHAKKKQAEEQPRESSPIHLHYSMYGQKTTHHVTERQGPSMYDEPSHSP
IIQVCRNPSYCSQHKDYELDDYDSDKPKHICHSILDKDNESLPNVKFRAVTDYPAEFVSL
GDASSLYKNILERDRELRQLSLTEYLRKNIPQLQPAVDMQVPNHHKELKLMETLVYTRPR
KVMVEQTKNEYFELKANLHAEPDYLEVLEHQTTFN
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgctggccaggattgttttcgtttgctccttctttgctggtgctacttttggagatacc
gagtccaaggtgttgtacgatggcgcttgcaaatctttgtgcacctgtgaagagacagat
ggacagttgtacataaactgtgaggagagcaacataagcaaaatgtcagacgttgaagtg
ccgtcagataaaccttttcatctaaacctatacaaaaatgacttagtggagttacttgca
acggacatggacgctttcaagaacgtcgtcaccttgcatctcggtgaaaacagcatacag
gagcttgaacctggtgtgttcagtgcgctgggatccctgagaaagttgcacataaacaga
aattacctggtcatgctgaaggaggacacatttcacggcttggtaaatttggaatacctt
caggctgacaccaacttcatccgggtcgtggagcctggggccttcagcaagcttgtccgt
cttaaagttctgatcctcaacgacaatgagatcgagttccttccgagcaacattttccgc
tttgtgcctctgacacatttggatctgcgtggaaacaagctgcagacactgccgtacgtg
ggtttcctggagcatattggtcgtatcattgagctccagttggaggagaatgactgggtg
tgcaactgcgaaatcttgcatttaaaggtctggatcgagaacatgcgagcgcagtcatcc
atcggcgaggtggtttgcaaccggcctgaagatcttaggggcacctctttggctagggtc
aaaagggatttactttgcccctctcatgctgacatcaacctcgaagagccatccaagtct
ctagacatggtcgtcaccccatccacaaaggttgttcagataccgaatgcaaaagatgat
gcaaagatacctacacctgcaaacggcctagggccttgtgtcattgtggggtttttaatg
cactgtgaggaccgaggcattcaaaggatatctgatctcggcattcttgaacaaagccca
accatgctggttttgacgggaaatatgatacaaagacttttcaaatacgattttgtgacc
tacgacggtttggaattgctcaatttggcaaacaaccaaatcgactacattgacaatgaa
acctttctgagtttgagcaacctgaaaaagctgtacctgaatggaaacaggattgagaaa
atatctgcaacgatgtttcttggccttcacaacctggaaaatttgtacttggagtataat
ctgatcaaagagatcgagcctggatcgttcaaccctttgacgaatctaaagctcctgtac
cttaacaacaacagactcaacactctccctgcacaaatatttcgcaatgtgcccttggtg
acattaaacctaaggaaaaatctctttacgcacttaccggtgagtaatgcgttggaccag
cttggaaatttgaagcagatttaccttgaggacaatccttgggactgcacttgtgatttg
gtcagcctcaaacagtgggtggaaaagcgtagcaaggaaaccgtggtgggtgccatctta
tgccacactcctaaaaaactgtctactgctgaggtcagaaacctgaagcatgacgttctc
tgccccggcttggtaacctataactccttacttggaggcaccgaggacggtatcccagtc
acgactgcgccggagggcggcaccagcggcttcttccggtccatcacagatgcggtgcca
ctatcggtgctcatcctctgccttctcatcctcttcctgaccgtcattttctgcgctgcc
gggattgtcgtgtttgtgctacaccgtcagcggagacatgccaaaaagaaacaggccgag
gagcaacctcgcgagagcagtcccatccaccttcactacagcatgtacggccagaaaacc
acccaccacgtaaccgaaaggcaaggacccagcatgtacgacgaaccttcccatagcccc
atcattcaggtctgcaggaaccccagttactgctctcagcacaaagactacgagttggat
gactacgatagtgataaacccaagcatatctgccacagcatcctcgacaaggacaacgaa
tcccttcctaacgtgaagttcagggccgtcaccgactaccccgccgagtttgtgagtttg
ggagacgcgagctccttgtacaagaacatcttagaaagagaccgggagctccgacagctc
agcctcactgaatacctcaggaaaaacataccgcagctacaaccagctgtggacatgcaa
gtccccaaccaccacaaagagctgaaactaatggaaactctcgtttacacgaggccgagg
aaggtcatggtggaacagactaaaaatgagtactttgagctcaaagccaatttacatgct
gaaccagactatttagaagtcttagagcatcaaacgactttcaactga
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