Pimephales promelas (fathead minnow): 120460542
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Entry
120460542 CDS
T08155
Symbol
si:ch211-286b5.4
Name
(RefSeq) afadin- and alpha-actinin-binding protein isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04517
IgSF CAM signaling
pprm04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120460542 (si:ch211-286b5.4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120460542 (si:ch211-286b5.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120460542 (si:ch211-286b5.4)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
120460542 (si:ch211-286b5.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF16
Motif
Other DBs
NCBI-GeneID:
120460542
NCBI-ProteinID:
XP_039504303
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MAHKHLARSPPSHSQAQDCSEILNSVCVPRHDETTLNFTHRIFREEHRDPITSLQEQLME
KDLHISRLQQALASERDKCARLQCRCHQQGAELRRREQIISRMRERLSQLADRHKQRGVS
MEIINVLPKRTGRRETGFKPTKADGRLEEALRLLLDRREAELREAMKLRHALTTLLHMLR
NNMARILQDDHTGLEDEDRDNVLVQSEQSLGDHVTGGVVQEWMQVQKRVRELVSQRAVAQ
GTDQEKLLAHLEEEVEQSRELIRAQQELLQDRVSSPLPAVLMDCYYLEEWERLQARWEEL
NRQRRSFQRERRAFTEAAIRLGHERTEFERQKASRLKSEFLSFSPVQKSCQWNRRESTAL
SDLRAAAPDQLSLSPCVTPSSVGSEVTPGSRLNGVMTPNTPELYSTLKLPCRRSRRILQS
PDEHNTDWPF
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcacacaaacatctcgcgagatcaccgccgtctcatagccaagctcaagactgctca
gagatcctgaactcagtgtgtgtgcctcgtcatgatgaaaccacactcaacttcacacac
aggatcttcagagaggagcacagagacccgatcacatctttacaggagcagctcatggag
aaggacctgcacatctcccggctgcaacaggctctggcttctgaaagagataagtgcgcg
cggctgcagtgccgctgtcaccagcagggggcggagctgaggcgcagagagcagatcatc
agccgcatgagggagagactctctcagctcgccgacagacacaaacagcgcggagtgtcc
atggagatcataaatgtgttgccaaagcggaccggacggagagagactggcttcaagccc
acaaaggctgatgggaggttggaagaagcactgcgtctgctgctggaccgcagagaagcg
gagctcagagaggccatgaaacttcggcacgcgctcaccacactactgcacatgctcaga
aacaacatggcacggatactacaagatgaccatacaggactggaggatgaggacagagac
aatgtgctggtccaatcagagcagagccttggtgatcatgtgaccggcggtgtggttcag
gagtggatgcaggtccagaaaagagttcgggagctcgtgtctcagagggcggtcgctcag
ggaacggaccaggagaagctgctggctcatctggaggaggaagtggagcagagccgggag
ctgatccgagcgcagcaggagttactacaggaccgtgtgagttcgcctctccccgctgtg
ctgatggactgctactatctggaggagtgggagcggctacaggcccgctgggaggagctt
aaccggcagaggaggagcttccagcgagagaggcgggctttcactgaggcggctatccga
ttgggtcacgagagaaccgagtttgagcggcagaaagcctcccgtttgaagtccgagttc
ctcagtttttctcccgtccagaaaagctgtcagtggaacaggagagagagcacagcactc
agcgacctccgtgcagcagctccggatcagctctctctctctccgtgcgtcactccgtca
tctgtggggtcagaggtcacgccggggtcccgtctgaacggggtcatgacccccaacacc
cctgagctgtactccactcttaaactgccctgccgcaggtctcggcggatccttcagtca
cctgacgaacacaacaccgactggcccttttag
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