Pimephales promelas (fathead minnow): 120460620
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Entry
120460620 CDS
T08155
Symbol
pdlim3b
Name
(RefSeq) PDZ and LIM domain protein 3b isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120460620 (pdlim3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120460620 (pdlim3b)
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120460620 (pdlim3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Glyco_hydro_2
Motif
Other DBs
NCBI-GeneID:
120460620
NCBI-ProteinID:
XP_039504402
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All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MPQNVVLEGPAPWGFRLSGGKDFNQPLTITRVTPGSKASRVNLCPGDIILAIQGESTDGV
THAEAQNKIKDSTNQLFLKIERPETKLWSPKVIEEGQVNPFKINLEADKQDVDYFEHKFN
VRPKPFTTASQRSDSTSQTLMGNVAQMPGTPSAGSKAAPSAQYNSPIALYSADNVSNTRQ
QAQVSTVVRQTSPSPKPLTSIEESHVYRMLQEDHELPHEPRQSGSFKALQDYVESDGTRP
MVTRSVKAPVSKPQAATASLQKLPLCDKCGTGIVGTVVKARDKYRHPACFVCSDCGVNLK
QKGYFFVEGQLYCEAHARMRMTPPEGHDLVTVYPTA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgccacagaacgtggtactagaagggccagccccttggggatttcggctttcaggaggc
aaagatttcaaccagccgttgaccataactcgggtgaccccaggcagtaaggcatctcgg
gtcaacctgtgtcccggagacatcatcctggccatccagggagagtccacagacggtgtg
actcatgctgaagctcagaacaagatcaaagactccaccaatcagcttttcctcaagata
gagaggccagaaactaaactgtggtcacctaaggttatagaagaggggcaagtaaaccca
ttcaaaatcaatttggaagcagataagcaagacgttgattacttcgaacacaagtttaat
gtcagaccaaagcccttcacaactgcaagccaaaggagtgacagtacatcccagacgctg
atgggaaatgtagctcagatgcctggcaccccatcggctgggtccaaggcagctccttct
gcacagtataactcccccattgcattatactcagcagacaatgtttcaaacacacggcag
caggctcaggtgtccacggtagtcaggcagacatcgcccagccctaaacccctgacatct
attgaagaatcccatgtataccgaatgctccaagaagaccatgagctgccacacgaacca
cgccagtctggatcgtttaaggccctgcaagactatgtcgagagtgatggcacaaggccc
atggtgacaagaagtgtaaaagccccagtgtcaaaaccacaagcggccacagcctcgctg
cagaagctgcctctctgtgataaatgtggcaccggcattgtaggaacggtggtgaaagct
cgggacaagtaccgccatccagcctgttttgtgtgctcagactgtggtgtgaacttgaag
cagaagggctacttttttgtggagggacagttgtactgtgaagcccatgctcgaatgaga
atgaccccacctgagggacatgatctagttactgtatatcccactgcttag
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