Pimephales promelas (fathead minnow): 120460636
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Entry
120460636 CDS
T08155
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
pprm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120460636
04082 Neuroactive ligand signaling
120460636
04519 Cadherin signaling
120460636
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120460636
Ion channels [BR:
pprm04040
]
Ligand-gated channels
GABA-A
120460636
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
BBL5
Motif
Other DBs
NCBI-GeneID:
120460636
NCBI-ProteinID:
XP_039504429
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MSSFSSLFALLFICRFLENSLLSAEVKDGEILPPTIQKLMKGYNKYLRPFFDNGPVTVGM
SLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFIVDS
KKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWGYNV
NDVMFNWARGNESVSGLDTLRLAQYTVEDHYTSASEAVYETGNYPRLIFHFELKRSILYF
ILETYVPSSLLVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIKA
IDVYLGICFSFIFGALIEYAVAHFCTLHHPDCNSALMYGHHMHDCEEEMNGMLTTIASNS
SRVKRRKDSVSASTGAGEPGLGPASEDKTPEGPSEPFSRCAKNMSIARNILRSVNCCHVE
NPHYIDNYSRLTFPLSFVFVNLLYWTYYLYF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccttcagctctttatttgccctgctcttcatctgcaggtttttggagaactcg
ctgctcagcgcggaagtgaaggatggagagattcttcctccgaccatccagaagctgatg
aaaggatacaacaaatacctccggcctttctttgacaatggtcctgtcacggtgggcatg
agcttagacatcgccagcattgacacgatctcagagatcaacatggattacacggccacc
atcttcctgcgtcagcgctggacggacgagaggctggtgttcgaaggcaataagagtctg
agtctcgacgggcgtctggtggagctgctgtgggtcccggacaccttcatcgtggactcc
aagaagtccttcctccacgacattacagtggagaaccgactgatccggatctttcccaac
ggaacggtcctctatgccctccggatcaccaccactgtggcctgtaacatggatctgacc
aaatatcccatggacaaacagacgtgcaccttacaactggagagctggggttataatgtc
aatgacgtgatgtttaactgggcgcgtgggaacgagtctgtgagcggactggacaccctg
agactggcccagtacaccgtcgaggaccattacacctccgcgtctgaggccgtgtacgag
acaggaaactatcccaggctgatctttcatttcgagctgaagaggagcatcttgtacttc
atcctggaaacctacgttccctccagcctgctagtggttctgtcctgggtctccttttgg
atcagccaatcgtccgtccccgcacgcatttgcataggcgtgaccacggtcctgacgatg
accacactgatgatgggcgcccgcacgtctctgcccaacgccaactgcttcatcaaggcc
atcgacgtgtacctgggcatctgcttcagcttcatcttcggagcgctgatcgagtacgcc
gtggcccacttctgcacgctgcaccaccccgactgcaacagcgcactcatgtacggtcat
cacatgcacgactgcgaggaggagatgaacggcatgctcacaaccatcgccagcaactcc
tcacgggtaaagagacgcaaagactcggtgtcggcgtccaccggcgctggagaaccgggt
ctcggacccgccagcgaagacaagacccccgagggcccgtccgagcccttcagccgctgc
gccaaaaacatgtccatcgcgaggaacatcctcagatccgtcaactgctgtcacgtggaa
aacccacattacatagacaactactcccgcttaaccttcccgctgtcgttcgtcttcgtc
aatctgctctactggacctactacctgtacttttaa
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