Pimephales promelas (fathead minnow): 120460658
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Entry
120460658 CDS
T08155
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120460658 (npas4l)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120460658 (npas4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_9
PAS_2
HLH
Motif
Other DBs
NCBI-GeneID:
120460658
NCBI-ProteinID:
XP_039504483
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MGFLLQISVRMSVASVRRSQRASKRFRSTKGASKARRDLINAEIRSLRELLPIGSEDQER
LSYLHSMALICTFIRKSVLLTGVGPGVAEDFSGVSALSEIFLQALPGFMVALTEDGKLLY
VSENVEEHLGLSMVDVLQGDSFYDMMDSRDAEALKLALRDPDDPTERSLVCRMRSSKAFR
LRHGCGSTLVKGRFLNSCVFVALCSPTADRLQDLHTLHTLHRPDMSLAHAPYSVVFHLGF
SAEELIGRSWYGLLHPDDITLAARCHTTLLREEGDTHTQMLVRLQRRDLSWVWVYACATI
GAAKESISCTSHIISETEAVYLKHKLYGSTPVSPGPTAAEMRIKTGSSSETGFFPTPPYS
PTSCHSSDFLSDDFLSSGLSALEQLVSDSRFCPPAFAASHPYPPAVCVPDSHLVPVCVLD
SHRVPVCVPVLDTSEIPEHFLFGPDLTPESSPAADTHTHFLYGLPDSGTLDTQTHSLAHQ
IRSLDTHWPLLDETVIDGILRDLDAIRPSGCVCDGPSQLQHCLYAAIQ
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgggctttttgctccagatctcagtgaggatgagcgtcgcgagcgtcagacggagccaa
cgcgcgtcgaaacgcttcaggtccactaaaggagcgtccaaagcgcgtcgggatctgatc
aacgctgagattcggagccttcgggagcttcttcccatcggatccgaggatcaggagcgt
ctgtcgtacctgcactccatggccctcatctgcaccttcatcaggaagagtgttctgctc
acaggtgttggtccaggtgttgctgaggacttcagtggagtgtctgctctgagcgagatc
tttcttcaagccctgcctggatttatggtggcgttgaccgaagacgggaaactcctgtat
gtgtcggagaacgtggaagaacatctcggcctgtccatggtggacgtgcttcagggagac
tcgttctacgatatgatggacagtcgagatgcagaagcgctgaagctggctctgagagat
ccggacgaccccacagagaggagtctggtgtgtcgaatgcgctcctccaaggccttccgg
ctccggcacggctgcggctcgactctggtgaagggacggttcctgaactcctgtgtgttc
gtggctctctgttcgcccaccgccgacagactgcaggatctccacacactccacacactc
caccggcccgacatgagcctcgctcacgccccctacagtgtcgtcttccacctgggtttc
tcagcggaggagctgattggtcgatcgtggtacggcctcctgcaccctgatgacatcaca
ctcgcggcccgctgccacacgaccctcctgcgagaggaaggcgacacacacacacagatg
ctggtccgcctgcagcgccgggatctgtcctgggtctgggtctacgcttgtgcaactata
ggagcagccaaagagtccatctcctgcacgagccacatcatcagtgaaacagaggccgtc
tatctcaaacacaagctgtacggcagcactccggtgtctccgggtccgacggcagcagag
atgcggatcaagaccgggagcagctcggagaccggcttcttccccacgccgccctacagc
cccacttcctgccactcctccgacttcctgtctgacgacttcctgtcctccggcctcagt
gctctggagcagctggtgagcgactcgcgcttctgcccgccagcgttcgctgcgtctcat
ccgtacccacctgccgtgtgtgtgccggactctcacctagtgcccgtgtgtgtgctggac
tctcaccgggtgcccgtgtgtgtgccggtgctggacacgagcgagatcccggagcacttc
ctgtttgggccggatctgacgccggagtcctcacccgctgcagacacacacacacacttc
ctctacggcctgccggactccggcacactggacacacagacacactcgctggcccatcag
atccgctcgctggacacacactggccactgctggacgagacggtgatcgacgggatcctg
cgggatctggatgcaatcagaccctcggggtgtgtgtgtgacggcccctcgcagctccag
cactgcctgtacgccgccatacagtag
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