Pimephales promelas (fathead minnow): 120460668
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Entry
120460668 CDS
T08155
Symbol
trim25l
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120460668 (trim25l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120460668 (trim25l)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120460668 (trim25l)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120460668 (trim25l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRIM_CC
PRY
zf-RING_UBOX
zf-C3HC4_4
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
ANCHR-like_BBOX
U-box
zf-RING_6
GlutR_dimer
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
120460668
NCBI-ProteinID:
XP_039504494
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MSGRVWTEEQFNCPVCLDLPTDPVTIPCGHSYCKACIADYWDNEGRKSGTYSCPECRQAF
NPRPTLCRNTMLAEAVEQLRSGNLKPSGRESIKSARRAATSASERARTRSKGAPKRLPAS
AVPCDRCPEPTPAVKTCLVCMASFCESHLKPHDLQDKLKSHELIAPTGNLSQKICPEHKY
LQEFFCRSCQMYVCWLCTSNQHKGHESLSTQAERSEKQKELGAVLSENHQRLQDRERELK
DMKKVLDTLTRSSNMVRDEADAVLSELQESVQRMLDLLQDVMLSAGQEKLNEAQDVVTKL
EAEVKQLKNKDGELKELINCQDNIYFLKTYQSLCSPLEGGELGAVTANPEATFDPVRSVI
VQLREKVEEMCDQELDKINKTVFNTTSFTVAERNGQKTGGLMKLFSGKGTRAARAQGPPP
LPSVSTRGSVNTRPQAVRNSEPRAVNRGVTNSQRPARPAREERDDPDRSRSSLRPRETQR
REERENPDDTVSLSSGRGRRRAENKEQERENQSSQRRQSTQSRSTRDEEQADRWSLSSIR
PRLRREDKKQVNGESLNPSQQSSSAADRQQPARQSDRWSLSSLLPRNRKKRQDTVKEATP
TIQEAESVMPRSPTSTSVWGAPTEVNPSLFLDSPTDNPFINPAFPTLREINIDSIQAPEP
RTRDEFLQYACDLTLDPNTAHRRLVLSEGDTVATLHQTSQAFPDLSQRFDCWTQVLCVQE
LSSERCYWEVEWRGRGSSLGVASASMPRKGADSGAGLGYNSQSWSLELSDMCCAAMHANQ
KQEIPVTYSPRVGVFLDRPAGTLSFYSVDDELVPLHVFHGSFPASLYAAFGVGCGVGVGL
DFAMGQFNSTSDSIKICPL
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgtgtatggacagaggagcagtttaactgccccgtgtgtctggatcttccc
actgaccccgtgaccatcccgtgcggccacagttactgcaaggcttgcatcgcagattac
tgggataatgaaggcaggaaaagcggaacctacagctgtcctgaatgccgacaggccttc
aaccctcgtcccactctctgccggaacacaatgctggctgaggccgtggaacagctccgg
agcgggaacctgaagccctccgggcgcgagtccatcaagagcgcgcgtcgcgcggcaacc
tcagcttcagagcgcgcgcgcacacggagcaaaggagccccgaaacgcctgcccgcctcc
gccgtgccctgtgaccggtgtccggagcccacaccggccgtgaagacgtgtttggtctgc
atggcatcgttctgcgagtctcacctgaaaccccacgacctgcaggacaagctgaagagc
cacgagctgatcgcgcccaccgggaacctgagtcagaagatctgccctgagcacaagtac
ctgcaggagttcttctgccgctcgtgccagatgtacgtgtgctggctctgcaccagtaac
cagcacaagggccacgagagcctgtccacacaggcggagcgctccgagaaacagaaagag
ctgggcgcagttctgtctgaaaaccaccagagactccaggacagagagagagaactgaaa
gacatgaaaaaagtcttagacacgctcacgcgttcctcaaacatggtgcgggacgaggct
gatgcggttctgtcggagctccaggagtcagtgcagcggatgctggatcttctccaggac
gtgatgctctccgccgggcaggagaagctcaacgaggcccaggacgtggtgaccaaactg
gaggccgaagtcaaacagctgaagaataaagatggagaactcaaagagctcatcaactgc
caggacaatatctacttcctgaagacgtatcagtccctgtgctctccgctggaaggggga
gagctgggagcggtgaccgccaaccctgaagccacgtttgatcctgtcaggagcgtcatt
gtccagctcagggagaaagtggaggagatgtgtgaccaggagctggacaagatcaacaag
acagtgttcaacaccacatcgttcacggtggcagagcgcaacggccagaaaacaggaggc
ttgatgaagctgttttctggaaaaggaaccagagctgctcgtgcacaaggacccccacca
ctgccgtcagtaagcacacgaggatctgtgaacacgcgtccacaagccgtgagaaacagt
gagccaagagcagtcaacagaggtgttacaaactcccaaagaccagccagaccagcgaga
gaggagagagatgaccccgacaggagtcgcagttcattgagaccaagagagacacaaaga
agagaggaaagagaaaaccctgacgacaccgtgagtttaagttcaggaagaggaagacgg
agagcagaaaataaagagcaggaaagagaaaatcaaagctctcaaagacgtcagagcaca
cagagcagaagtacacgtgatgaagagcaagcggaccgctggagcttgagttcaatcaga
ccgagactgaggagagaagacaaaaagcaagtcaatggagaaagcctgaatccctcacag
caaagctcaagcgctgcggaccgacagcagccggccagacaatcggaccgatggagtctg
agctctctcttacccagaaacaggaagaagagacaggacacagtgaaagaggccacaccc
acaatacaggaggcggagtcagtgatgccacgtagccccacctctaccagtgtctgggga
gcgccaacagaagtgaatccctctcttttcctggactcaccaactgacaatcccttcatc
aatcccgcttttcccacattgagagaaattaacattgacagtattcaggccccagagccg
aggaccagagacgagttcctgcagtatgcttgtgatttgacccttgacccaaacacagcc
caccggcgcctggtcctgtctgaaggagacaccgtagccactcttcatcagacgtcccag
gcgttccctgacctctctcagcgcttcgactgctggacgcaggtgctgtgtgtccaggag
ctctcctctgagcgctgctactgggaggtggagtggagggggcggggctcatctctgggc
gtggccagcgcctcgatgccccgcaagggggcggattcaggggcggggcttgggtataac
agccaatcgtggagcttggagctgtcagacatgtgctgcgctgccatgcacgccaatcag
aagcaggagatcccagtgacctacagtccccgtgtaggcgtgtttctggaccggcccgca
gggactctgagcttctatagcgtggatgacgagctggttcctctccacgtctttcacggg
tcgttcccagcctcactgtatgctgcgttcggggtcggctgtggggtcggcgtggggctc
gacttcgccatgggtcagttcaactccacgtcagacagcattaaaatctgtcccttgtga
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integrated database retrieval system
