Pimephales promelas (fathead minnow): 120460748
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Entry
120460748 CDS
T08155
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1
KO
K15516
fragile X mental retardation protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120460748 (fmr1)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120460748 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
120460748 (fmr1)
mRNA cycle factors
Stress granule specific factors
120460748 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
FXMR_C2
KH_9
Tudor_FRX1
KH_1
Agenet
Motif
Other DBs
NCBI-GeneID:
120460748
NCBI-ProteinID:
XP_039504614
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MDELAVEVRGASGAFYKAYIKDVQESTVTVSFENNWQPERQISFQDVRFPPPTGFQKEIN
ESDEVEVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPVNPNKA
ASKNTFLKIRLDVPEDLRQMCAKDSAHKDFKKAIGAFNVTYDSEEKQLVILSVNEVTSKR
IGMLSDMHFRSLRTKLTLILRNEEATRQLESSRQLASRFHEQFVVRDDLMGLAIGTHGAN
IQQARKIPGVTTIDLDEETCTFHIYGEDQEAVRKARSYLEFSEDIIKVPKNLVGKVIGKS
GKLIQEVVDKSGVVRVRVEPENDKKPSPLEEGMVPFVFVGTKESISNARILLDYHLNYLK
EVDQLRMERLQIDEQLRQIGGGPRALPGRPEKEKPFMADNGMGPSRGGSKPFGRGGRGRR
GPTLASGTNSEASNASETESDHRDELSDWSLAPTDEESMGYPKRAPDGRKRGGGPRGRGG
RGRGGGYKTEEMHWNESRSRSSRDSKLRPQEDSLQIRIDSNNERSVHTSRGSQALAGDSG
GNRQRPIKDRVIKKEKQDVPDSQAVVNGVS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctcgcggtggaagtgcgaggggcgagtggagctttctacaaggcttatatt
aaggatgttcaggagagtacagtcacagtgtcttttgagaacaattggcagccagaacgt
cagatttctttccaagatgttcggtttccacctccaaccggctttcagaaagagataaac
gagagtgatgaagtggaggtttactccagggccaatgataaggagccttgtggatggtgg
cttgccaaagttcgcatggtgaaaggcgagttttacgtgatagaatacgcagcctgtgac
gcaacgctaaatgaaatcgtcacattagagaggctacgacctgtgaaccccaacaaagcg
gcgtcgaagaacacctttctcaaaatcagattagatgttcctgaagacttgagacagatg
tgcgcaaaagactcggcacataaagacttcaaaaaagcgatcggagcctttaacgtcact
tatgactcggaagaaaagcagttggttattttgtctgttaatgaggtcacctcaaagcga
ataggcatgttgagtgacatgcacttcaggagtctgcgcacaaagctgacgctgatactg
aggaatgaggaagcaaccagacagctggagagctctcggcaactggcttcaaggttccat
gagcagtttgtggtgcgtgatgacctcatgggattggccataggcacccatggggcgaat
atccagcaagcccgaaagattcctggggtcacaaccatagatctggatgaagagacctgc
acgtttcacatctatggagaggaccaggaagctgtacggaaggccagaagctacctggaa
ttttctgaagatattatcaaagttcctaagaatttagtcggaaaagtcattggcaagagt
gggaagctgattcaagaggttgtggataaatcgggagttgtcagagttcgagtggaacct
gaaaacgacaaaaagccttctccattagaggagggaatggtgccgtttgtgtttgttggg
acaaaggaaagcatttcaaatgcacgtattctgctggactaccatctgaattatctaaag
gaggttgatcagctgcgaatggagagactgcagatcgacgaacagctcagacagattgga
ggaggacccagagctctgccgggacgacctgagaaggaaaaacccttcatggctgataat
ggaatgggaccatcacggggaggcagcaaacccttcggtcgtggagggagagggagacgg
ggccccacactggcctcaggcaccaattctgaggcctccaatgcatccgagactgaatcc
gaccacagagatgagctcagcgactggtccctggcccccacagatgaggagtccatgggt
taccccaaaagggcccctgatggacgcaaaaggggtgggggaccccggggtcgtggaggg
agaggaagaggaggaggatacaaaactgaagaaatgcactggaatgagtcccgctctcgt
agttccagagactcaaagctgagaccccaggaagactcattgcagatccgcatcgacagc
aataacgagaggagcgtccacaccagccgaggctctcaagctctggcaggagacagtgga
gggaaccggcagagacccataaaggaccgagtgataaagaaagagaagcaggatgtcccc
gacagccaagccgttgtgaatggcgtttcgtag
DBGET
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