Pimephales promelas (fathead minnow): 120460771
Help
Entry
120460771 CDS
T08155
Name
(RefSeq) zinc-activated ligand-gated ion channel
KO
K04819
5-hydroxytryptamine receptor 3
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120460771
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120460771
Ion channels [BR:
pprm04040
]
Ligand-gated channels
Serotonin (5-HT3)
120460771
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
UPF0542
Motif
Other DBs
NCBI-GeneID:
120460771
NCBI-ProteinID:
XP_039505040
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MFVTFLEKSSKGSEMVLQHRITLLLLIFSCLIVLTDSCNNRCLANMMINKKMKSAPQGNT
CSVNVSITSIKYETMSFDTKNMQMSSRIKVNMVWRDLELQWNTTISDAEAVMLPVDKIWT
PELVLENVIDVTVKPYTHDVQVNRDGLVDYSAILFISVSCNDINLFNYPFVHGECSVAIN
GWNQSKCEVNFIHPPNVSIVGGIQGEWETLSVIIEQDQSFQNSSYLSVSLSISPFSAVVT
LILPSVLIMLADLVTFSLPVQGGERNSLKVTLVLSFTMFLLILNDHLSSGGRCSPILHYH
FCFCLVNLVFSMMVSICLTRLTLNDTILSWKCSKNNKKHKKTVSLGQDEDAGVIATKTFS
DLPSEVASLQKVVTFLENIDQKAEVTSSNESFVDGLDKICFCFFLFIDIIYIIVVVIITR
TDLCKEKRKELWVNEDFYDPPYTNGHIHYYDNYSFYDYFFKF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgacatttttggagaagtcaagcaaagggtctgaaatggttcttcaacacagg
atcactttgttgcttctcatcttttcatgtctgattgtcttgacagattcatgtaacaat
cgatgtctggcaaatatgatgattaataagaaaatgaagagcgcaccacagggtaatact
tgttctgtcaatgtatccatcacttcaatcaagtatgagaccatgtcttttgacacaaaa
aacatgcaaatgagcagccgtatcaaggtaaacatggtgtggagggatcttgaactacag
tggaataccacaatttctgatgctgaggctgttatgttaccagttgacaaaatctggact
cctgaattggttttggagaatgtgatagatgtaaccgtgaagccttacactcatgatgtg
caggtgaaccgggacggattggtggactatagtgctatcttgttcatatccgtgagctgt
aatgatatcaaccttttcaactacccctttgtgcatggagaatgttctgtggctatcaat
ggatggaaccaaagcaaatgtgaggttaacttcatccatccacctaacgtatcgattgtt
ggaggcattcaaggagagtgggagactttgagtgtgataatagaacaagaccaatcgttt
caaaacagcagctatctctcggtctctttatccatcagtcctttcagtgctgttgtgacc
ctgatcctgcccagtgtgttaataatgctggctgacctggtaactttttctctgccagtt
caaggaggagaacgcaacagccttaaggtcaccttagtcctgagtttcaccatgttcctc
ctcatcctcaatgatcacctaagcagtggtggacgatgtagccctatccttcattatcat
ttctgcttctgtctggtcaatctggtgttcagcatgatggtgtctatttgtttgacacgt
ctgacgttgaatgacacaatcctgtcttggaaatgctcaaagaacaataaaaaacacaaa
aaaactgtgagcctgggtcaggatgaagatgctggggtgattgcaacaaaaacgttcagc
gatctgccttcagaagtggcttccctccaaaaagtagtcacttttttggaaaacattgac
caaaaagcggaagtgacaagcagcaacgagtcttttgtggatggcttggataaaatctgt
ttctgtttttttttattcattgacataatttatatcatcgttgttgtaattatcaccaga
acagacttgtgcaaagaaaaaaggaaggaattatgggttaacgaagatttctatgatcct
ccttatacaaatgggcatatacattattatgacaactacagtttttatgattactttttt
aaattttga
DBGET
integrated database retrieval system
