Pimephales promelas (fathead minnow): 120460850
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Entry
120460850 CDS
T08155
Symbol
chl1b
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120460850 (chl1b)
Cell adhesion molecules [BR:
pprm04515
]
Immunoglobulin superfamily
L1 family
120460850 (chl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
C2-set_3
Ig_PDGFR_d4
Fn3_VIN3
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
120460850
NCBI-ProteinID:
XP_039504756
LinkDB
All DBs
Position
Unknown
AA seq
1259 aa
AA seq
DB search
MRSLRKVLLLLGACLNMSCRYQTNALDIPFDVLARMNMEQLPTITEQSPASVIAFSFEES
FPVKCEATGNPRPEFKWTKNGQDFDPYLDPRLITLDDSGTFTIPNNGNLTEFQGNYRCFA
TNKLGTAMSEEIEFIVPNVPKFPKEIIDPIEVMEGQSVILECNPPKGIPPLQIYWMTIGL
QHIELDERVSLGLNGNLYFSNAIETDSRRDYSCFAAFPLIRTIVQKTAMSVVVKNNKLMK
DSVSGSGRGYANSLLERKPRLLVPTGLESHTRLVKGEVLQLECIAEGFPTPKVEWVKIGF
NNLPERVVVERHGKLLTVEMVNEEDDGKYMCRAKNPHGEVVHYFHVTVEEPPEFEIEPQS
QLGTIGADVVIKCVVKGNPKPSVAWRVNGRPLNEVPVPNRKILKDGTISIHNANPENSAV
YQCEAANKHGTILANANIMIMNIQPLILTENNLQYMAVEGKGVVMHCKVFSSPTASITWS
KADSVNAVEGERFYVHRNGSLEIHSVMKEDMGEYSCFAQNTEGKVAIAATFEVKDPTRIV
DPPRDLRVLFGTTIQFSCQAESDPSFGDDFEILWEKDGMALNGSENARYILDGGVLEIIN
VSFGDQGLYVCVARTPVDQDMAVAQLSVVDVPDPPEDVILSEHNGRSVKVQWIPGDDHNS
SITEFVIEFEESQHEPGSWREITRIPGNHHSALLKLHGHVDYRFRVSAINEVGRGLPSRT
TERYKTPASAPDKNPENIKIEGHLPHEMDINWEPLSPIEHNGPGLEYKVSYRRQGSGEDW
MEHIVKRHSFVVKNTPTFVLYEIKIQSKNHAGWGPDPKIITAYSGEDFPSAAPEDVAVEV
MNNTMVKVRWDHVHKDKLHGHLGGYRVSWWRLRSLLDSKKTHGDKHTATFSGERNHAVVT
GLMPFSEYSLIVMAFNSRGNGPGSHSVSFKTPEGVPGQPAAFSVSNVQKNKVTLTWSPPV
DANGVLIGYILQYQLINDTEELGPLMTLNISTDSNKQHLQDLEALSKYKFYLRCCTRVGC
GPAVSEERTTVPEATVLNISTSVSHNFANISWIPGTEQTESELYVAFMNNREGNWKISDA
LNSSKTFHIIEGLEPGTEYTVRLMTKSWVDNSSIFEDVIKTRAKGLASIHGGISNQGWFI
GLMCAIALLTLSVLIACFVNRNKGGKYSVKEKEDMHPDLESQGMNDDTFCEYSDNDEKPL
KSSQHSLNGDLKGGDCGDSMAEYGDEDTHFNEDGSFIGEYSGRKARVSMEIKGNNQSTA
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcattacggaaagtcctcctacttttgggcgcttgccttaatatgagctgcagg
tatcaaactaatgccctggatattccatttgatgttttagcacgcatgaacatggagcag
cttcccacaattacagagcagtctcctgcttctgtgatcgccttctctttcgaagagagc
ttcccggtgaagtgcgaggccacaggaaaccccagaccagaattcaagtggacaaagaat
ggtcaagactttgatccgtatctggaccccagattgataacgttagatgattccggaaca
ttcaccattcccaataatgggaatctcacagaattccagggcaattatcgctgctttgcg
accaacaagttaggaacggccatgtcggaagagattgaattcattgttcccaatgttccg
aagttccctaaagagatcattgatcccatcgaggttatggaaggtcagtcagtcattctg
gagtgcaacccacctaaaggaattcccccactgcaaatctactggatgacaataggtcta
cagcacatcgagctggatgaaagagtatcattgggtctgaatgggaacctgtacttctca
aacgccattgagactgacagccgcagagactacagctgctttgctgccttcccgctcata
cgaaccatcgtccagaaaactgccatgtccgtcgtggtcaaaaacaacaagttaatgaag
gactcagtgtctggtagcggcagaggttatgcaaactctcttttggagaggaagccccgt
ctactggtgcccacaggattagagtcacatacacgtctggtgaaaggcgaagttcttcag
ttggagtgcattgcagaggggttccccacaccaaaggtggagtgggttaaaataggcttc
aacaatcttccagaaagggtcgtggtggagcgtcatgggaagttgctcaccgtagagatg
gtaaatgaggaggacgatgggaaatatatgtgcagagccaaaaatcctcatggagaggtt
gtgcattattttcatgttacagtagaggagcctcctgagtttgagattgaacctcaaagc
cagttagggacgattggagctgatgtggtgatcaagtgtgtcgtgaaaggaaatcctaaa
cctagtgttgcatggagagtcaacggccgaccgttgaacgaggtcccagtccccaacagg
aaaatcttgaaagatggcaccatttccatccacaacgcaaacccagaaaacagcgctgtt
taccagtgtgaggccgctaacaaacacggcaccatcctagccaatgccaacatcatgatt
atgaacatccagcccctgatcttaacagaaaataatctgcaatatatggcagtggagggg
aaaggtgtggtcatgcactgtaaggtcttcagctcgccaaccgccagtattacgtggagt
aaagctgacagtgtcaatgcagtggaaggagaaaggttttatgttcatcggaatggttcg
ctggagatccacagcgtgatgaaagaggacatgggggagtattcttgtttcgctcaaaat
accgagggcaaagttgccattgctgcaacatttgaagtcaaagatcccaccagaatagtc
gatcctccacgtgatttgcgggttttgtttggaaccactatccagttttcatgccaggca
gagtccgacccttccttcggtgatgactttgagatcctttgggaaaaagatggcatggcc
ctcaacggcagcgagaacgcaagatatatcctggacggtggagtgcttgagatcattaat
gtgagctttggagaccagggcttatacgtctgtgtggccagaacaccggttgaccaagac
atggcggttgcgcagctttcagttgtggatgttcctgatccaccagaggatgtgatcctg
tctgaacataatgggagaagtgtgaaagtgcagtggattccaggagatgaccataacagc
tccattactgagtttgttattgagtttgaggaaagccaacatgagccgggcagctggaga
gagattacgagaatacctggaaaccatcattccgctctgctgaagcttcatggacatgtg
gactaccgttttagagtctccgccatcaatgaggtcggaagaggtttaccaagccggacc
actgaaagatacaaaactccagcttcagcccccgacaagaacccagaaaatatcaagatc
gaaggtcatttgccacatgaaatggatatcaactgggagccattgtcacctattgagcac
aacgggcctggtctggagtacaaagtaagctacagaagacaaggcagcggagaggactgg
atggagcacattgtgaagaggcattcgtttgtggttaaaaacaccccgacgttcgtcctt
tacgagatcaaaattcaatccaagaaccacgcgggctggggtccggaccccaaaataata
acagcatactcaggagaggatttcccctcagcagctccagaggatgttgccgtagaagtg
atgaacaacaccatggtgaaggtcagatgggaccatgttcacaaggacaaactccatgga
catctggggggctacagggtaagctggtggaggcttcgtagtctgctggactcaaagaaa
acacacggcgacaaacacacggcgacgttctcaggcgagaggaaccatgcggtggtcaca
gggctaatgcctttctcagaatacagcctcattgtcatggcctttaacagtagaggaaac
gggccgggcagtcattcggtcagcttcaagacccctgagggagtacccggtcaaccagct
gctttcagcgtttcaaacgtccagaaaaacaaggtcaccttgacctggtctcctccggtt
gacgcaaatggagtcctaatcggctacatcctgcaatatcagctaataaatgacacagag
gaactaggtcctctgatgaccctgaacatctctactgatagcaataagcagcacctccag
gacctggaagcactgagcaaatacaagttttacctacggtgttgcacgcgggtgggttgc
ggaccagctgtcagtgaggagcgcaccactgtccccgaagcaactgtgttgaatattagc
acctcagttagtcacaactttgcaaatatcagctggattcctggcacagaacagacggag
tcagagttatatgttgcctttatgaacaaccgtgaaggtaactggaagatatccgatgcg
ctaaactcttctaagactttccacatcattgaagggctcgaacctgggactgaatacaca
gtgcgtcttatgactaaaagctgggttgataattctagtatttttgaagacgttatcaag
accagggccaaaggtctggccagtattcatggaggcatctccaaccagggctggttcatc
gggctcatgtgcgccatagctctgctcactctctcggtgctcatagcctgctttgtgaac
cgaaacaaaggcggaaagtactcagtgaaagagaaagaagacatgcaccccgatttggag
tcccagggtatgaatgatgataccttctgtgaatacagcgataatgatgagaaaccactg
aaaagcagccagcattcgttgaatggtgacttgaaaggaggagactgtggagacagcatg
gcggaatacggcgacgaggacacgcacttcaacgaggacggctcttttatcggagaatac
tctggacgcaaggcgagggtctccatggaaatcaagggaaacaatcagagcactgcgtaa
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