Pimephales promelas (fathead minnow): 120460933
Help
Entry
120460933 CDS
T08155
Symbol
cntn3b
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120460933 (cntn3b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pprm00537
]
120460933 (cntn3b)
Cell adhesion molecules [BR:
pprm04515
]
Immunoglobulin superfamily
Contactins
120460933 (cntn3b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pprm00537
]
Others
120460933 (cntn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
C2-set_2
Tissue_fac
UL16
Motif
Other DBs
NCBI-GeneID:
120460933
NCBI-ProteinID:
XP_039504908
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MTLLWKRLVVLSIIGCLTVSSAQAEDTKFMGPSWKTEPEDLILPIHSPEQEAVLTCEASG
VPSPQYRWSLNGTFIDLHGDERRRLSGGNLIITGLDRDQDSGVYQCTASNARGTILSKRA
TLQFAYLENFKTQTRSAVNVREGQGVVLLCGTPLHSGDLTFTWVFNEYPHFVLQDSRRFV
SQETGNLYIAKVEPSDVGNYTCVVNNTITKERVFSSPTPLVLRNDGAMGEYEPKIELHFP
DTIPAAKGSTLKLECFALGNPVPKISWRRTSDVLFPNKVKLKNSNAILEIPSFQQEDTGT
YECIAENSRGKNAARGRVSFHATPHWLQTTTDTALSIEENLFWECKANGKPKPSYSWLKN
GDTLISEGRVQIENGALSISSLNLSDGGMYQCVAENKHGIIYSSAELMVLASAPSFTQNP
LSRVLKARSGSDVSLDCRPHASPRAISLWKKGTEILQRNERISLFPNGTLKIANVTKRDG
GSYTCIAKNQFGTASTTGRLIITEPTRISQGPSSTEITVGESIVLLCQVTADPALDVAFS
WAFNGQPIDFHQDVNHFERVGGSFSGDLMIRNIQLNHGGKYVCLIDTDVESLSADAILVV
KGPPSPPHLVVVEEVTDSTAQLSWSPGQDNGSPIIGYAIQGRTPFTVGWQAVDTVPEVIN
GNTLTATVVGLNAWVEYEFRVLASNSVGMGEPSPPSTKIRTEDAVPDTAPTDVGGGGGTK
SELVITWEPVPEELQNGEGFGYIIAFRPVGMVTWTRAVISALSVTRYVFRNDTIPPFSPF
NVKVGAFNNRGEGPFSTIATVFSAEEVPSASPERVSAKSLSAADIEVTWEPIPATPERVL
GYEVVYWEDDTKPDTVGKVRITGNYTAVNVSGLQGNTQYYLAVCAFNTAGTGPQSVPVNV
TTKKPPPGQPPQNVEWNLIGSQLLLQWDPVIALETESEVTGYIVLYRRHRNNDMYSVITN
KTSVELTLNPNDNYVIQIKTLSEGGLGEGSEPIHIHQLSMGARGSRAGRLCTLSLSPLLI
CALSTLSAS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgacgttactatggaaacgacttgtggtgctatcaatcattggctgcctcacagtctca
tcagctcaagcagaagacacaaagtttatgggtccaagctggaaaacagaaccagaggac
ctgatactgcccatccattcccctgagcaggaggctgttttaacctgtgaggcatctgga
gtcccttcccctcagtacagatggtctctaaacggaacgttcattgatcttcatggtgac
gagaggcgtcgcctgtctggaggtaacctgatcattactggcctggatcgagaccaagac
agtggtgtctaccaatgcactgcctccaatgcccggggaaccattctcagcaagagagcc
acattacaatttgcatatctggaaaacttcaaaacgcagacaagaagtgctgtcaatgtc
agggaaggccaaggggttgttttgttatgtggcacacctttgcattctggagacctcaca
ttcacctgggtcttcaacgagtaccctcactttgtcctgcaagacagccggcgctttgtg
tcccaggagacggggaatctctacatagctaaagtggaaccatctgacgttgggaattac
acctgcgtggttaataacactattacaaaggagagggtgttcagttcgccgacaccttta
gtgctgagaaacgatggagcgatgggagagtacgagcccaaaatagagcttcatttccca
gacaccattccagctgctaaaggatccacgctgaagctagaatgcttcgccctgggaaat
ccagttcctaagatcagctggagaagaaccagcgatgttttattcccaaacaaagtcaaa
ctgaaaaattctaacgccattctggagattccgagttttcaacaagaggacacagggacg
tatgagtgcatagcggaaaacagtcgtggaaagaatgctgcaaggggtcgtgtgtctttc
catgccacacctcattggctgcaaacaacgacagacacagcattgtccattgaggagaat
ctgttttgggagtgcaaagccaatgggaaaccaaagccctcttatagctggctgaagaac
ggagacactcttatatctgagggccgagtgcaaatagagaacggcgccctctccatctcc
tcgctaaacctctcagatggcgggatgtatcagtgtgtggcggagaacaagcacggcatc
atttattccagcgccgaactgatggtgcttgcctctgctcccagcttcacccagaatcct
ttgagccgagtgcttaaggctcgctcgggtagtgacgttagcctagattgccgaccacat
gcctcgcccagagccattagcctgtggaaaaaagggactgagatactacaaagaaacgaa
aggatttccctcttccccaatggaactcttaagattgccaacgtaactaagcgagatgga
ggtagttacacgtgcattgctaaaaatcaatttggcactgctagcacaacaggaagactg
ataatcacggagcccacgaggatcagccaaggccccagcagcactgaaatcactgtgggg
gagagcatcgtgcttctctgccaggtgactgccgatccagccttggacgtggccttctcc
tgggccttcaacggtcagcccatcgatttccatcaagacgtgaaccacttcgagcgagtg
ggagggagcttttccggtgatcttatgattcgaaacatccaacttaatcatggtgggaaa
tacgtttgccttattgatacagacgttgagagtttgtctgctgatgcaatattagttgtt
aaaggtccccccagccccccacacttggtcgtggtggaggaggtcacagacagcacggcc
cagctgtcctggagcccaggccaggacaacggaagtcccataataggatatgccatccag
ggcaggactccctttactgtcggctggcaagctgtcgacacagttcctgaggtaatcaat
gggaatactttgaccgcaaccgttgtgggtttaaacgcctgggtggaatatgagttcaga
gtgctggccagtaacagtgtcggcatgggagagcccagtcccccgtctaccaagatcaga
acagaggatgctgtccctgacacggctcccactgatgttggaggcggaggaggtaccaaa
tcggaattagtgataacatgggagcctgttccagaagagttgcagaacggagagggcttt
ggttatatcattgctttccggccagtgggcatggtcacttggacccgcgccgtgatctcg
gcactcagcgtcacccgctacgttttccgcaatgacaccattccaccattctcgccgttc
aatgtcaaagtgggagcgttcaacaaccgcggggaaggacctttcagcactatcgcaaca
gtgttctccgcagaagaagtgccgagcgcatcgccagagagggtgtcggcaaaaagtctg
tcggcggccgacatcgaagtaacctgggagccgattccggccacccctgaaagagttctc
ggatatgaggtggtgtactgggaagatgacaccaagccggatacagtgggtaaagtgcgg
atcactggaaactacacagcagtgaatgtcagcggcctacaggggaacactcagtattat
ttggcggtgtgtgccttcaacactgcaggaactggcccccagtccgtacccgtcaatgtt
accaccaaaaaaccaccgcctggacagccccctcagaatgtagagtggaatctgattggc
tctcagcttttgcttcagtgggatcccgtcattgctctcgaaactgaatctgaggtcacc
ggatacatagtgctgtacagaagacaccggaataatgacatgtactctgtcattaccaac
aaaacctcggtggaattgaccctcaatccaaatgacaactacgtcattcagatcaagacc
ctcagtgaagggggcttgggggaaggaagcgagcctatccacatccaccaactcagcatg
ggtgcacgtggatccagagcgggaaggctgtgcacactttctctctctccgctcctcatc
tgcgctctgtcgacgctcagtgcctcctga
DBGET
integrated database retrieval system
