Pimephales promelas (fathead minnow): 120460941
Help
Entry
120460941 CDS
T08155
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120460941 (ssrp1a)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120460941 (ssrp1a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
120460941 (ssrp1a)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
120460941 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120460941
NCBI-ProteinID:
XP_039504923
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MGDTLEFNDIHQESKGSWNDGRLKFSKQSVVYKSHKTGKVDSIPGPELSEAQWRRVCLGH
GIKLVTSTGHIYKYDGFKDTDFEKISAFFKANYKLELAEKDMCVKGWNWGTAKFSGSLLS
FEVSESPVFEIPLSSVSQCATGKNEVTVEFHQNDDAEVSLMEVRFYVPPNTGDDGTDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDLSLALNMNEDEVEKRFE
GKLSKNMSGPLYEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQKNQFTFSNIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGGEGYSDSDEDQHDAYLERMKQEGKIREEGDGSDESEGDSDESF
NPGEEDDDVPEEYDSNASASASEGEDGDSEDEGQKKKVEKKPKKVVKEKKERKPRKEKKV
KDAAAPKRPMSAYMLWLNGNRERIKSENPGISVTEISKKAGEMWKQLGKDRKEEWDKKAE
EAKKQYVKAMDEYKKSGGGGAASVSKEKKKKGGKVEAKKKSVAEKEKRKEGGNESFKSKE
FISSEESSSESDNDRSGKRKASDDDDEEEAASTPASSEESGSD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactctggagtttaatgacatccatcaagagtcgaagggatcttggaacgat
gggcgtctgaagttcagcaagcagtctgtggtctataaaagccataaaacggggaaggtg
gacagtatcccggggcccgaactctctgaggcgcagtggcgtcgggtctgcctgggtcac
gggatcaaactggtcaccagcactggacacatctacaaatacgacggcttcaaagacaca
gattttgagaaaatctctgcgttttttaaagcgaactacaaattggagttggcagagaag
gatatgtgtgtgaagggctggaattggggcaccgccaaattttcagggtctctgctgtcg
tttgaggtgagcgaaagtcctgtctttgagatcccgctgtccagcgtgtcccagtgtgcg
acgggaaagaacgaggtgacggtggagttccatcagaacgatgatgcggaggtgtcactc
atggaggtccgcttctatgtcccgcccaacactggagacgacggcacagaccccgtggag
gcattcgctcagaatgtcctctcaaaggcagatgtcatccaagctactggagatgccgtg
tgtatctttaaagaacttcagtgccttacgccgagaggaaggtatgatattcgtatctac
ccctccttcctgcacctgcatggtaagacttttgactataagatcccctacaccactgtc
ctgcgtctcttcctgctgccacacaaggaccagaggcagatgttctttgtgatcagtctc
gacccgcccattaagcagggtcagacgcgttatcatttcctcatcctcctcttctccaaa
gatgaagacctcagtcttgctctcaacatgaacgaggatgaggtggagaagcgttttgaa
gggaagctcagtaagaacatgtctggtccgctctatgagatcgtcagcagggtcatgaag
gctctggtcaacaggaagatcacagtgcctgggaacttccagggtcactccgggtctcag
tgtataacgtgtgcgtacaaggcgagctcagggctgctgtatcctctggaaagaggcttt
atctatgtgcacaagccaccggttcacctgcgcttcgaggagatctcctgcgttaacttc
gccagaggaacaaccaccactcgctcctttgacttcgaaatagagaccaagcagaaaaac
cagttcaccttcagcaacattgagagggaagaatatggaaagcttttcgactttgtcaat
gccaagaaactgaacatcaagaacagaggatttaaagagggcatgaaaggaggagaaggc
tacagtgactctgatgaagaccagcatgacgcttacttggagaggatgaaacaagagggc
aagatcagagaggagggagacggcagcgatgaatccgagggcgatagcgatgagtctttc
aaccctggggaagaggatgacgacgtcccagaagagtatgacagtaacgcttcagcgagt
gccagcgagggagaggatggtgacagtgaagatgaaggacagaagaaaaaagttgaaaag
aagcccaagaaagtggtgaaagagaagaaagagagaaaaccacggaaagagaaaaaggtg
aaagacgcagctgctcctaagaggccgatgagcgcttacatgctgtggctgaacggcaac
agagaacgcatcaagagtgagaatcctgggatatcggttactgaaatctccaagaaggct
ggagaaatgtggaagcagctgggcaaagacaggaaagaggagtgggacaaaaaagcagaa
gaggccaagaaacaatacgtgaaagccatggatgagtacaaaaagagtggagggggagga
gcggcatctgtttctaaggaaaagaaaaagaaaggagggaaggtggaagctaagaaaaag
agtgtagctgaaaaggagaaaaggaaagaaggtggaaacgagagctttaagagcaaagag
ttcatctccagcgaggagagctcatctgaatctgacaacgacagaagcggcaaacgcaag
gcttctgatgacgatgatgaagaggaagccgcctccacaccagccagctcagaggagtca
gggtctgactga
DBGET
integrated database retrieval system
