Pimephales promelas (fathead minnow): 120460975
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Entry
120460975 CDS
T08155
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04210
Apoptosis
pprm04218
Cellular senescence
pprm04620
Toll-like receptor signaling pathway
pprm04621
NOD-like receptor signaling pathway
pprm04622
RIG-I-like receptor signaling pathway
pprm04623
Cytosolic DNA-sensing pathway
pprm04625
C-type lectin receptor signaling pathway
pprm04920
Adipocytokine signaling pathway
pprm05132
Salmonella infection
pprm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120460975 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120460975 (nfkb1)
04218 Cellular senescence
120460975 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120460975 (nfkb1)
04621 NOD-like receptor signaling pathway
120460975 (nfkb1)
04622 RIG-I-like receptor signaling pathway
120460975 (nfkb1)
04623 Cytosolic DNA-sensing pathway
120460975 (nfkb1)
04625 C-type lectin receptor signaling pathway
120460975 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
120460975 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120460975 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
120460975 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120460975 (nfkb1)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120460975 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
120460975
NCBI-ProteinID:
XP_039504974
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MAGEDTYHPGFMVEPIEFNNEALWMNMDPTPFPGIHNNNVMRTVDGPYLRIIEQPKQRGF
RFRYGCEGPSHGGLPGASSEKNRKSYPQVKICNYQGAARVVVQLVTNSPEPHLHAHSLVG
KQCDKGICIADLQPKDSSISFPNLGILHVTKKNVSKILEERMIEAYRMGYNYGIFINPEI
DALHGEVRIPRELTEPERTLISSAANNQSKEMDLSVVRLMFTAFLPDSDGGFSRRLDPVI
SDPIFDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDDSGLTWE
AYGDFSPTDVHRQFAIVFKTPKYRDQNLQKPISVFVQLKRKSDNETSEPKPFTYHPQIID
KEEVQRKRQKTLPNFQDYSGAGGGAGGMFRGGGGGSTAGGGPSGGGGGHFFQGYSNYNNY
GTGYNFSGMGGGGTSIKHTYQDPVEDSEEDSDSDTDDDPASGGGVRICAQPEPVPLNRGG
ASDDAQPTEDLELDATGCVLEPHLAELAGRHAQALFHYALSGDARMLLAPQRPLMTTQDE
NGDTGLHLGVIHSQADAVRNLAQVISDLPGEDVLNMRNDLYQTPLHLAVLTQQKEAVEAL
LEAKVDVTLTDRHGNTALHLAAQQKEESMLRLLLKHKSVAQLTSMPNTAGLCALHLAVQA
NSLSCVRALLDGGADVEVQELTCGRTALHLATELGNLSLAGCLLLEVLLTPPYMINEAVN
GYFSANISIILKFTLLLYCFFN
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggctggagaggacacataccatccggggttcatggtggaaccaattgaattcaataac
gaagcattgtggatgaacatggacccgacaccatttccaggcattcacaacaataatgtt
atgaggacagtcgacggaccttatctgcgaatcatcgaacaaccaaaacagaggggcttc
aggttccgctatggatgtgaaggcccttcccatggaggactcccaggagcctccagcgag
aagaacaggaagtcgtacccacaagtgaagatctgcaactaccagggagcagcacgagtg
gtcgttcagctggtgaccaactctccggagccccatcttcatgctcacagtctggtgggc
aaacagtgcgataaaggaatctgcattgccgatttgcagcctaaagattcaagtatcagt
tttcctaacttgggcattttacatgtgacaaagaagaacgtgagtaaaattttggaggag
aggatgattgaggcctacaggatgggatataactacggcatattcatcaatcctgaaata
gatgccctacatggagaagttcgcatacccagagaactcacagaacctgagaggaccctg
attagcagtgcagccaataatcagtcgaaggagatggacctgagtgtggtccggctcatg
ttcacagccttcctgcccgacagtgatggagggttctcccgcaggctggatccggtcatt
tccgaccccatctttgacagcaaagccccaaatgcatccaatttgaagatagtacggatg
gatcgaactgccggctgtgtgacaggaggagaggaggtctatctgctatgtgacaaagtc
cagaaagatgacatccaggtgcggttttatgaagatgatgattcgggtctaacctgggag
gcctatggggatttctctccgactgacgtccatagacagtttgctatcgtcttcaagacg
cctaaatatcgagaccagaacctccagaagcccatctctgtgtttgtgcagctcaagagg
aagtcagacaatgagacaagcgaacccaagccattcacttaccatccacagattatagac
aaagaagaggtccagagaaagagacagaaaaccctgccaaacttccaggactacagcggc
gcaggaggcggagctggaggcatgtttagaggaggagggggtgggtctacagcagggggc
ggtcccagtggaggaggtggagggcattttttccagggatattcaaattataacaattat
gggactggatacaacttctcaggcatgggaggaggcgggactagcatcaagcatacatat
caagacccagtagaagacagtgaagaggatagcgacagtgatacagatgatgatcctgct
tcaggtggaggggtgcggatctgtgcccagcctgaacctgttcccctgaatcggggaggg
gctagtgatgacgcacagcctacagaagatctcgagttagacgccacaggctgtgtgtta
gagccacatttggctgagctagctggaagacatgctcaagctctctttcattacgcatta
agcggtgatgctagaatgcttctggctccacagcgccccctcatgaccactcaagacgag
aacggagacacgggtttacatctgggagtgatccacagtcaggcagatgccgtgcgaaat
ctagcacaagtcatctctgatctccctggagaggatgtactcaacatgaggaatgatctc
tatcagactcctttgcacctcgcagtgttgacgcagcagaaagaggcagtcgaggcttta
ctggaggctaaggtggacgtcacgctgacagatcgccatggaaacacggcgcttcacctg
gcggctcaacagaaagaggaaagcatgctgcgattgctgctaaagcacaagtcagtggcg
cagttaactagcatgcccaacacagcaggtctctgcgcgcttcacctggctgtacaggcg
aacagtctaagttgtgtgcgggccctgttggatggcggggcagacgtggaggttcaggag
cttacgtgtggccgcacagcacttcatctggccacagagctgggaaacctttccctcgcc
ggctgcctcctgctggaggtactactaacacctccatacatgatcaatgaggcggtgaat
ggctactttagtgcaaatatttctattattttaaagtttactctgctgttgtattgtttt
ttcaactga
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