Pimephales promelas (fathead minnow): 120461108
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Entry
120461108 CDS
T08155
Symbol
nkx2.5
Name
(RefSeq) homeobox protein Nkx-2.5
KO
K09345
homeobox protein Nkx-2.5
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120461108 (nkx2.5)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
120461108 (nkx2.5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
CadC_C1
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
120461108
NCBI-ProteinID:
XP_039505168
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MAMFSSQITSTPFSVRDILNLEQNQEDMVSLDMSQRLDSALLPTSSCMLSTFKQEQFMEM
PSGASLFSEDLHDDKGNKNFGTAAFYGKTFLEMDYVKDAKTDDTFEDKEKKDISCSQEDP
SEDLKLDDADRPKQRKRRKPRVLFSQAQVYELERRFKQQKYLSAPERDHLANVLKLTSTQ
VKIWFQNRRYKCKRQRQDQTLEMVGIAPPRRISVPVLVRDGKPCLGDTSTYNTSYNVGIN
HFTYNTYPAFSNFPSPGNTNYSCNYPSSMSSIPPSQSNSSYMNFGVGDLNNVQASFQSSN
GVPSLHGIRAW
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttttccagccaaattacttccactcctttctcagtgcgggacatattgaac
ctggagcagaatcaggaggacatggtctctctggacatgtctcaacggctggacagtgct
ctccttccgacctcatcctgcatgctgtccactttcaaacaggagcagttcatggaaatg
ccatccggagcctctctcttcagcgaagacctgcatgacgacaaaggcaacaagaacttc
ggcactgctgccttttatgggaagactttcttagagatggactatgttaaagacgcaaag
acggatgacacgtttgaagacaaagagaaaaaagacatcagctgctcccaggaagatccg
agtgaagacctgaagctggatgatgcggatcgacccaaacagaggaagaggaggaagcct
cgtgttctcttctctcaagcgcaggtgtacgagctggagcgacgcttcaaacagcagaag
tacctctctgcacctgagagagaccatttagccaacgtgctcaagctcacctccacacag
gtgaagatctggttccagaacagacgctataagtgcaagaggcagcgtcaggatcagacc
ctggagatggttggcatcgccccgccgaggcgcatctcggtgccggtgctggttcgggat
gggaaaccgtgcctgggagacacgtcaacgtataacacctcgtataatgtggggatcaat
catttcacctacaacacataccctgcgtttagtaattttccgagtccgggcaacacgaac
tactcatgtaactatccatcgagcatgtccagcatcccgccctcgcagtcaaacagcagc
tacatgaactttggagttggggatctgaataacgtccaggcttctttccagtccagcaac
ggggttccctcactacacggcatccgagcgtggtga
DBGET
integrated database retrieval system
