Pimephales promelas (fathead minnow): 120461167
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Entry
120461167 CDS
T08155
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
pprm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120461167 (gabra6a)
04082 Neuroactive ligand signaling
120461167 (gabra6a)
04519 Cadherin signaling
120461167 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120461167 (gabra6a)
Ion channels [BR:
pprm04040
]
Ligand-gated channels
GABA-A
120461167 (gabra6a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120461167
NCBI-ProteinID:
XP_039505249
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MAFLLVLFCLTSVANATSKQKINSENITRILDGLLDGYDNRLRPGSGVSVTEVKTDIFVT
SFGPVSDVKMEYTMDMFFRQMWVDERLAFKGPIEILPLNNRMVDKIWTPDTFFRNARKSH
AHNTTTPNKLFRIMQNGTVFYTMRLTVSAECPMVLMDFPMDGHTCPLLFGSYAYTNREIV
YTWRKGLQASVDFPPESSSLLQYDLLSQALFSKTYKFSTGLYSVQVVHFHLQRKLGYHLI
QTYIPLIMVVVLSQVAFWINKESVPARTVAGITTVLTMTTLSISARSSLPKVSYATAMDW
FIAVCFAFVASALVEFAAVNYFTTLEVNREKRKLSKASILESITQGSDDEEEMPQSDGYS
RRRKADSLSEVPRTRIPIFLQGSAVPPNVMLAGTSTIDQYARILFPLAFGIFNLIYWYIY
LSKDTMEKPREIE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcttttggtcttattttgtctcacaagtgttgcaaatgcaacaagtaagcaa
aagataaattcagaaaacataacacggatcctagatggactacttgatggttatgacaat
cgactgaggccaggatctggagtctctgtaactgaggtcaaaacagacatatttgttaca
agttttggaccggtctctgatgttaaaatggagtacaccatggatatgtttttccgccaa
atgtgggttgatgagaggttagcctttaaggggcccattgaaatattgcctttgaacaac
cgcatggtggacaagatctggacaccggacacattttttcgcaatgcaaggaaatcgcac
gcacacaacacgacgactcctaacaagctgttccggatcatgcaaaatggaacagtcttt
tacaccatgaggctaactgtaagtgcagaatgtccaatggtgttgatggactttcctatg
gatgggcacacatgtcctctcctgtttggaagctatgcttacactaatcgtgaaattgtc
tacacatggaggaagggtctccaggcatctgtggattttcctccagaatcatcaagccta
cttcagtatgatcttttgagccaggccttgttcagtaaaacatataaattcagtacaggt
ctgtattctgtccaggttgtccatttccatcttcagagaaagcttggctaccatcttatc
caaacgtacatccctttgattatggtggttgtcctgtcacaagtcgcattctggatcaac
aaggagtctgttccggctcgaacagtggctggaatcaccactgtgctcaccatgactact
ctaagcatcagtgcccgttcctcgctacccaaagtctcctacgccaccgccatggactgg
ttcatcgccgtctgctttgccttcgtggcttcagccctcgttgagtttgctgcggtcaac
tactttaccacgctcgaggtcaacagggaaaaacgcaagctctccaaggcctccattctg
gagtccataacccagggcagcgatgatgaggaagagatgcctcagtctgatggctacagt
cgtagaagaaaggcagactctttgtctgaagtgcccagaactcgcattcccatcttcctt
cagggctcagctgtcccacccaacgtaatgctggccggcaccagtaccatagaccagtat
gcccgcatcctctttcctctggcctttgggatcttcaacctcatctactggtacatctac
ctcagcaaggacaccatggaaaagcccagggagatcgagtga
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