Pimephales promelas (fathead minnow): 120461249
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Entry
120461249 CDS
T08155
Symbol
arhgef11
Name
(RefSeq) rho guanine nucleotide exchange factor 11
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
120461249 (arhgef11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120461249 (arhgef11)
Membrane trafficking [BR:
pprm04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120461249 (arhgef11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
PDZ_2
RGS
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
120461249
NCBI-ProteinID:
XP_039505348
LinkDB
All DBs
Position
Unknown
AA seq
1418 aa
AA seq
DB search
MSVRQPTSTLDRLSSLTLGDSERRSPPGQQRDTLSDLSSDNTGTGLVQRCVVVQRDNLGF
GFTVCGERIKLVQNVRPGGAAVKAGVQEGDRIIKVNGSVVSSMSHQEVVKMIKSGTYVAL
TLQGPPPLVGSVPLQPLPTDLLPNHRTAPGGEAPPPPLTPPTGSSTPTQRITGPKPLQDP
EVKKHATEILRKMLEQEEAELQNLLEEQSRNPSPSLEERIESAKRRANQVRVKIQQDVDG
TRSDALANYLTAGEGRLSMDSSEGDVEACESPFSSPSAFLRNPLLRRQGSDTHPCDPGGK
TQIIGPEEEEEEDDGYSINEMDGPFQDIELLKSRPAHMTVFMRYVFGQLLDPNPLLFYLC
VEAYLGSSPKDARSLAPQICSHFLDHDAPLKIKVREEILTDIENRLHAQEDIRGPLSELQ
QQVLPDIQDQLQDYRNKQTMGLGSLFGESDLQQLDGDPARERQVVDRQVLALWEILSKHE
EDRSSPLASAVHLYLRHSGIKLRDSKVFPGLMSEKEKWLPFFPKAKKLSSARREKDGEDK
KRNPILKYIGKPRGTSQSTFHVPLSPTEVRPGSVKNIIQQFESNSDSIEEGDVEGQRLSS
SSFGEESMDSPTISVRLARSESLKAQGEGRRRGGGPGAEFVPRSRSDVDMEDCEEREGPG
LRPLHHSASSSASSSSARSLENATPPYTPRSQRRLVEPPVALLPDAPALEEDVIDPQNWQ
ETVDTHVLTSLSSREVDRQAVIYELFTTEASHLRTLRVLDQVFYQKMQSVLSPDELSCIF
LNLRQVYELHASLCESMRKRRESAIVQGIGDIMLARFEGEAGEQFEEQVSLLCSQQSQAL
ELIKNKQRKDPRFTHLIQECEASPHCRRLQLKDLLVSEMQRLTKYPLLLDNIIKHTEMSS
PDLQQLQRAQVCCRGILQAVNEVVRETEHRHRLSQYQRRLDLTPLERQANPVAAQFKNLD
LTRKRMIHEGPLTWRVSKDKAIEIQALLLSDLLLLLLKGPDERLILRCPSRSLGGATDLK
MTFCPVVRLDSSLVRSVATDNKALYVISTSERQIYELVAGSSSEKNTWKDQLEKTIASAT
QGSGSAKPESPVRSSGVSSSANDLDESLSERVSLERDSASDDECALTPTTPAGQSEAGVR
QDGDGFLQSKAGVAEAALQDVETLRQLIFRDLDDGWSQDSDDTPTNETANERNSFTDGPG
AEFPEPASSETLSRWGEEPVEAPPPEVQVVRKVMGAGCSLPDDITDDVTASQSSKDRGNM
FYLVMPKDQSSAPADESSTDELTHRSVCSSPFIIEEEEPETPCLAPADPSLTEPLSRGQG
LGQSQTSTQRHVIKNSDQIFNTMEQLMRKLQHLRDIEADHHTLLKTLRQPCPAVQSSDAV
VCRCPAVARAPSLDRGAGDGKEGVSTESAPPKIQSTGF
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtccgacaaccgacctccacgctggacaggttgagcagtctgacactgggagac
tcggagcgcaggtctcctcctggccagcagagggacacactgtccgatctctcctcagac
aacaccgggacgggtttagtccagcgatgtgtggtggtgcagagggacaatctggggttc
ggcttcaccgtgtgcggcgagaggatcaaactagtgcaaaatgttcggccaggtggagcg
gcggtcaaagccggagtccaggaaggagaccgcatcatcaaggtcaatggttcggtggtt
tcgtccatgtctcatcaggaagtcgtaaagatgatcaaatctgggacgtatgtggcgctg
actcttcagggcccgcctcctttagtcgggtctgtcccgcttcagcccctccccaccgac
ctcttgcccaatcacaggacagcaccgggtggggaagccccgcctcctccactgactcct
cccacaggaagtagtaccccaacccagagaatcacaggacccaaaccattacaggacccc
gaggtgaagaaacacgccacagaaatcctcaggaagatgttggagcaggaggaggccgag
ctacagaacctgctggaggagcagtctcgaaacccctcgccgtcgctagaggagcggatc
gagagcgccaagcggagagccaatcaggtccgagtgaagatccagcaggatgtggacggc
actcggtctgacgcgctggctaactatctcaccgctggagaaggacggttatcgatggac
tccagtgaaggagatgtggaggcgtgtgagagtcccttctcctccccctccgccttcctc
aggaaccccctgctgcgccggcagggctccgacacacacccctgcgacccgggaggaaag
acgcagatcatcggaccagaggaagaagaagaggaggatgatgggtattcgatcaatgag
atggacgggccgttccaggacatcgagctgctgaagagtcgtccggcacacatgacggtc
ttcatgagatacgtgttcggccagctcctggaccccaacccgctgctgttctacctgtgt
gtggaggcgtacctgggctccagcccgaaggacgcacgttctctcgcccctcagatctgc
tcacacttcctggaccacgacgcccctctgaagattaaagtccgtgaggagatcctgact
gacatagagaaccgcctccatgcgcaggaggacatccgagggccgctctctgaactccag
caacaggtgcttccagacatccaggaccagcttcaggactacaggaacaagcagacgatg
ggtctgggctctctgtttggagagagcgacctgcagcagttagacggagacccggcgaga
gagagacaggtggtggacagacaggtgctggcgctctgggagatcctatcaaaacatgag
gaggacagaagttctccgttagcgtctgcggttcatctgtatctcagacactcaggcatt
aaactccgagactcaaaggtgtttcccggtttgatgtccgagaaggagaagtggctcccg
ttcttccccaaagctaagaagctgagcagcgcaagaagagagaaggatggagaagacaag
aagagaaatcccattctgaagtacatcgggaaacccaggggcacatcgcagtccacgttc
catgtcccgttgtcccccaccgaagttcgtcccggcagcgtgaagaacatcattcagcag
ttcgagagtaactcggactcaattgaggagggagacgttgagggacagcgactgtcttcc
agcagcttcggagaggaaagcatggacagtccgaccatctcggtgcgtttggctcgcagc
gagtctctgaaggcacagggggaggggcgtcggcgaggaggtgggccgggggcggagttt
gtccctcgttcccgtagcgacgttgacatggaggactgtgaggagagggaggggcctgga
ctgagaccgttacatcacagcgcctcgtcttcagcctccagcagctccgcgaggtctctg
gagaacgcgacgccgccgtacacaccccgctcccagcgcaggctcgtggagcctcccgtg
gccctgctcccggacgccccggccctcgaggaggacgtgatcgacccgcagaactggcag
gagacggtggacacgcatgtgctcacgtcactctcctcgcgggaggtcgacagacaagcc
gtcatctacgagctgttcacgacggaggcgtctcacctgcgcacgctgagggtcctggac
caggtgttttaccagaagatgcagagcgtcctgagtccagacgagctgtcctgcatcttc
ctcaacctgcggcaggtctacgagctgcacgcgagtttgtgtgagtccatgaggaagcgc
agggagtcggccatcgtccagggcatcggggacatcatgctggccagattcgagggcgag
gctggagagcagtttgaggagcaggtgtctctcctgtgcagtcagcagagtcaagcgctc
gagctcatcaagaacaagcagcgcaaagacccgcgcttcacacacctcatacaggagtgt
gaggcgagtcctcactgtcgtcggttgcagctgaaggatctgctggtgtcggagatgcag
cgcttgactaaatatccactgctgctggacaacatcatcaaacacaccgagatgtcctct
cccgatctccagcagctgcagagagctcaggtgtgttgtcgagggattcttcaggccgtg
aacgaggtcgtcagggaaacggagcaccgacaccggctcagccaataccagcgcaggctc
gacctcacgcctctggagagacaggccaatcccgtcgcagcgcagttcaagaatctggat
ctgaccaggaagaggatgatccacgaggggccgctcacatggagagtcagcaaagacaaa
gccatcgagatccaggcgctgctgctgtcggatctgctgctgctgctcctgaagggtccc
gacgagcggctcatcctgcgctgtccgtcacgctcgctgggcggagccaccgacctcaag
atgaccttctgtcccgtcgtccgcctcgactcctccctcgtgcgctccgtcgccacagac
aataaagcgctgtacgtgatcagcacgtctgagaggcagatctacgagctggtggccggg
tcctcgtcagagaagaacacttggaaagaccagctggaaaagacaatcgcgtcagccact
cagggatccggatcagctaaaccagagtcacccgtgcggtcctcgggtgtgtcttcatca
gcgaatgacctcgacgagtctctgtcggagcgagtgtctctggaacgggactctgccagt
gatgatgaatgtgctctgacgcccaccactcccgccggccaatcagaagccggcgttcgc
caggacggggacggtttcctccaatcgaaagctggcgttgcagaagctgctcttcaggat
gtggaaaccctccgacagctgatcttcagagacctggacgatgggtggagtcaggattca
gacgacacgcccacaaacgagacggccaatgagcggaactcttttacagacgggccgggg
gcggagtttcctgagcccgcatccagcgagactctcagccgatggggggaggagcctgtg
gaagctccgcccccggaggtgcaggtggtgaggaaagtcatgggtgcgggctgttctctt
cctgacgacatcaccgatgatgtcaccgccagccaatcctctaaggacagagggaacatg
ttttacctggtgatgcccaaagatcagtccagcgctccggccgacgagagcagcaccgat
gagctcacacaccgcagtgtgtgctcgtcgcccttcatcatcgaggaggaggagcccgag
acgccctgcctcgctccagctgacccatcgctcactgagcctctgagtcgggggcaaggg
ctcggccaatcacagaccagcacacagcgtcatgtgatcaagaactcggaccagatcttc
aacaccatggagcagctgatgaggaaactgcagcatctgagggacattgaggcggatcac
cacacactgctgaagacgttacgccagccgtgcccggcggtacaatcatccgatgccgtc
gtgtgccggtgtcccgccgtggcccgggcgccttcgctggaccggggagccggagacggt
aaagagggcgtctcgacagaatcggctccgccgaaaatccagtccactggcttctga
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