Pimephales promelas (fathead minnow): 120461420
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Entry
120461420 CDS
T08155
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120461420 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120461420 (usp38)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120461420 (usp38)
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120461420 (usp38)
Ubiquitin system [BR:
pprm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120461420 (usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
120461420
NCBI-ProteinID:
XP_039505542
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MDKILEALVSSSHPLTVKRAIVKKVIEAAEKEVTEEQCQALYHLTTRFILLGEDAFQRQV
GLQVQEAYARYHRDEFARFFSKEYVLGLLQQGYSSLDSRDPAILDFIHGSLRLLISCPAV
LELAPLLQTEVLRIICERPEPATCAKLATILTDFPQCVPREKAGVLFCQQLVRTFAYFNC
PATEERELREYVTQVTRVSALLQGIWKADPATLLPSLQEVFAIISSTDPSFEPSIALASL
VQHIPLQMITVLIKSLTTDQNVKDASMTQALCRMIDWLSWPLANHVDTWVIALLKGLAAV
QKFTILIDVTLFKIEQVFNRLWYPIVRQGALVVLSHMLLSFQHSPEAFHLVVPHIVPLVK
SLKSDGLSNSKIFLLQFAELVHCMMYQYSGFPDLYDSILESIKDLPKPSEEKIKFVLNQS
AWTSQSNSFASGLLKITGKSETGKTGLVNLGNTCYMNSIIQILFMATDFRRHVMSLHLNG
SNSLMKKLQLLFAFLAHTQRAAYSPRSFLEVSRPPWFTGGSQQDCSEYLRFLLDRLHEEE
KTLSALQLTSPKPEPGTTSAETLHSAVSQPVADAPSHADPVVAEGDGRTLVERMFGGRLS
TAICCMQCHSLSEKEEPFTDLSLAFCPSMSHAHGPTDEHKSSSAVGPCQGSVNGGSESSE
GSVKEGSGTKMEMPVVEPSLSVTDLVDYFLAPEILENENCYFCERCASLQRAEKVMRVVA
APEYLILTLLRFSYDATCHVRRKILDNVGIPLHMCLPLRQHSSPASSPSSTAVASSSDSP
ESGENLAKKLKPSQKEEGMTESRTKSKKNDAEMLSVPYVLSSVVMHSGMSSESGHYYSYG
RNVSSTDGYVALPCPKTMENPSPSESSTATQDNTGCTDQKSTDWFLFNDSRVTFTNFQSL
QNVTCRFPKDTAYVLIYRKQEVSGQPSNSGPVVNGSKLSGEPPLQKELMDAITKDNKLFL
QEQELNARARALQATSASCSFRPNGSDDNEPPGSCGPSGGGGGGGFNTISRLVF
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggataagattttggaggcgctggtgagctcctcccatcctctgactgtcaaacgggct
attgtgaaaaaagtgatagaagctgcagaaaaggaggtgacagaggagcagtgccaggcc
ttgtaccatctcaccacccgctttattctcctgggtgaggatgcttttcagcgacaggtt
ggcctccaagtgcaagaagcatatgcacgctaccatcgtgatgagtttgcccgcttcttc
agcaaggaatacgtgctcggtcttcttcagcagggctacagctctttggacagcagagac
cctgccatcttggacttcattcacggttctctccgactgctcatcagctgcccggctgtg
ttagagttggcaccgctgctacagacggaggtcctacgcatcatctgtgaacggccagaa
ccagcaacctgtgccaaactggccaccatactgacggacttccctcagtgtgtcccacgt
gagaaggcaggagttcttttctgtcagcagcttgtgcgcacttttgcgtacttcaactgt
cctgccactgaagagcgggagttgcgggagtatgtgacccaagtgaccagggttagtgct
ttgctgcagggcatctggaaggctgatccggccacgctgctaccgtcgctgcaggaagtg
tttgccatcatttcatccacagatccttcatttgaaccttccattgctctagcaagcctg
gtccagcacattcctctgcaaatgatcacagtcctcatcaaaagcctcaccactgaccag
aatgttaaagatgccagtatgacacaagcgctctgcaggatgattgactggttgtcctgg
cctctagccaatcatgtggacacttgggtcattgctttattaaagggactcgctgctgtt
caaaagttcaccattctcatagatgtcacactgttcaaaatcgaacaggtctttaatcgt
ctctggtatcccattgtgagacagggagcgctggtggttctttcacacatgctgcttagt
ttccagcactctcctgaagccttccacttagtggtccctcatatagtcccgcttgtgaag
tctttgaagagtgatggcctttccaacagtaaaatcttcctgctgcagtttgcagaactc
gtccactgcatgatgtaccaatattctggctttccagacctctatgacagcattcttgaa
tccataaaagacctgccaaaacctagtgaggagaagataaaatttgttctgaaccaaagt
gcctggacctcacagtcaaattcatttgcctcaggcctgctcaagatcaccggcaaatca
gaaacggggaagacaggacttgtaaatctgggcaacacttgctacatgaacagcatcatc
caaattttatttatggctacagatttcaggcgacatgttatgtctctgcatttgaatggc
agcaacagcctcatgaaaaagctccagcttctatttgccttcttggctcacacacagaga
gcagcatattcgccaaggagttttttggaggtttctcggccgccatggtttacaggcgga
tcccagcaagactgctctgagtatttgcgctttcttttggacaggttgcatgaggaagag
aagactctctcagccctccagctgaccagcccaaaacctgaaccaggaaccacttctgct
gaaactctccacagtgctgtaagtcaaccagtcgctgatgcgccatcacacgcagatccc
gttgtagccgagggagatggtcgcactctagtggagcgtatgtttggtggtagactctct
acagccatctgttgcatgcagtgccacagcctgtcagaaaaagaggagccttttacagac
ctctctcttgccttctgcccctcgatgtcacatgcacatggtcccactgatgagcacaaa
agctcctccgctgtgggaccctgccaagggtcggtaaatggaggcagtgaatcctcagaa
ggctcggtaaaagaaggttcaggaaccaagatggagatgcccgttgtggagccctcgctg
tctgtgaccgatttagtggactatttcctggctccagaaatcctggagaacgagaattgc
tacttctgtgaacgctgcgcctctctacagagggccgagaaggtcatgcgggtggtggcg
gcacccgagtacctcattctgactctgctgcgcttctcgtacgatgccacctgccacgtg
cgtcgcaagatcctggacaacgtgggcattccgctgcacatgtgcctgcctctacgccaa
cacagtagccctgcttcatcaccttcctcaactgcagttgcttcctcatctgactcccct
gagagtggcgagaatctagctaaaaagctcaagccttctcagaaagaggaggggatgacg
gaaagcagaacaaaaagcaagaaaaacgatgcggaaatgctgtcagtgccgtatgttttg
agttctgttgtaatgcattctggaatgtcctctgagagtggtcactactactcgtatgga
aggaatgtgagtagcacagatggttatgttgctctcccatgtcctaagaccatggaaaac
cccagcccatcagagagctcgacagccacacaagacaacacggggtgcactgaccagaag
tcaaccgactggttcttgtttaatgacagccgagtgacttttacaaactttcaatcgttg
cagaacgtcacctgtcgcttccctaaggacacagcctatgtcttgatctataggaaacaa
gaggtcagtggacaaccaagcaattcagggccggtcgtaaatggctcgaaactgagtgga
gagccacccctgcagaaagagctgatggatgccataaccaaagacaacaaactcttccta
caggaacaggagctgaatgccagagctcgggctctccaagcaacctctgcttcttgttca
ttccgacccaatgggtctgatgacaacgaaccccctggcagctgtggaccctcgggtggg
ggtggaggagggggtttcaataccatcagcagactcgtcttttaa
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integrated database retrieval system
