Pimephales promelas (fathead minnow): 120461497
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Entry
120461497 CDS
T08155
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00100
Steroid biosynthesis
pprm01100
Metabolic pathways
Module
pprm_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120461497 (lss)
Enzymes [BR:
pprm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
120461497 (lss)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
120461497
NCBI-ProteinID:
XP_039505658
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MTDGTCLRRRGGPYKTEPVTDLSRWRLSNVEGRQTWRYIEEADSMDRQQSMLESHSLGLD
TGELISASPAADTAVKAALKGMDFYSRLQAEDGHWAGDYGGPLFLLPGLLITCHITKVPL
PDAWKQEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYTTLRILGVGPDDPDIVRARNA
LYSKGGAVGIPSWGKFWLAILNVYSWEGMNTLLPEMWLFPTWVPAHPSTLWCHCRQVYLP
MSYCYAVRLSADEDPLVLSLRQELYVQDYSSIDWPAQRNNIAACDLYRPHSTLLTIAYLI
LNVYEAHHSTILREKAVKELYDHIKADDRFTKCISIGPISKIINMLVRWYVDGPSSPVFQ
EHVSRIPDYLWMGLDGMKMQGTNGSQLWDTTFAVQAFLEAGAQDVPRFTECLTQAHRFLD
LTQIKDNPPEYEKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQEQCSFLKENIP
TERLFDAVNVLLSMRNPDGGFATYETKRGGKLLEMLNPSEVFGDIMIDYTYVECTSAVMQ
ALKHFHSKYPEHRAKEIRTTLQRGLDYCRRVQRPDGSWEGSWGVCFTYGAWFGLEAFACM
GHTFQNGSVCVEVKHACEFLLSKQMDDGGWGEDFESCEQRCYVQSKNSQIHNTCWALLGL
MAARYPDIRVIERGIQVLIDKQLPNGDWPQENISGVFNKSCAISYTSYRNVFPVWTLGRF
SRLYPCSSLAGKLKP
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggaacgtgtttgcggagaagggggggcccctataagactgagccggtgacg
gatctcagccgctggaggttgagtaatgtggagggcagacagacctggaggtacattgag
gaggcagacagcatggacagacagcagagcatgctggagtctcactctctgggactggat
acgggtgagttaatctccgcgtcccctgccgcagacactgcagtaaaagctgccctgaag
ggaatggacttctacagccgcctccaggctgaagatggacattgggcaggggattatggt
ggaccccttttcttacttccaggtttgctcataacctgtcatattaccaaggtccctctg
ccagatgcatggaagcaggaaatggtgagatatctccgctctgtgcagctgcctgatgga
ggctggggcctgcacattgaagacaagtctactgtttttggaacggcattaagttatacc
accttgagaattctcggagttgggcctgatgatccagatatcgttcgggcaaggaatgct
ttatacagcaaaggtggtgctgtcggcattccctcgtggggtaaattctggttggccatc
ctcaacgtatacagctgggaaggaatgaatacgctcttaccagagatgtggctgttccca
acctgggtgccggcacatccctccaccttatggtgccactgtcgtcaggtctacttgccc
atgagctactgctatgcggtcagactgtccgctgatgaagatcctctggtgctcagttta
agacaggagctctatgtccaggattactcatctattgactggccagctcagaggaacaac
attgctgcctgtgacttgtacagaccacacagcaccttgcttactattgcttatttgatc
ctgaatgtgtatgaagcccatcacagcactatactaagagaaaaagctgtcaaggagctt
tatgaccatattaaagcagacgatcgcttcactaagtgtatcagcatcggcccgatctcg
aaaattatcaatatgttggtacgctggtatgtggacggaccctcatcacctgtcttccag
gagcatgtgtcaaggattcctgactacctatggatgggtttggatggtatgaaaatgcag
ggtacaaatggatcacagctatgggataccacattcgcagtgcaagcatttcttgaggca
ggtgcccaggacgtccccaggtttacagagtgcctcacacaagcccatcgtttccttgat
ctaactcagatcaaagataaccctccggaatatgagaaatactatcgacaaatgaacaag
ggaggttttcccttcagcacacgggactgtggctggatagttgcggactgtacggcggaa
gggctgaaatctgtgatgctactgcaggagcagtgcagtttcctcaaagaaaacattccc
acggaaagactctttgacgctgtcaatgtgctgctaagcatgagaaatcccgatggaggg
tttgccacatatgagaccaaacgtggtgggaaactgctggagatgctgaacccttctgaa
gtatttggtgatattatgatcgactacacgtatgtggagtgcacctcagctgtaatgcag
gcactcaaacactttcacagtaaatatcctgagcacagagcaaaagagattaggactact
cttcagcgagggctggactactgcaggagggttcaaagacctgatggctcatgggaaggg
tcttggggagtctgtttcacatatggagcctggtttggtctggaggcatttgcatgtatg
ggccacactttccaaaatggatctgtttgtgtggaggtgaaacatgcctgtgagttcctt
ctgtcgaagcagatggatgatggaggctggggcgaggactttgagtcatgtgagcagcga
tgctacgttcagagcaagaactcacagatccacaacacttgttgggctttgctggggttg
atggctgccaggtaccctgacattagagtgattgagcgaggcattcaagttttgattgat
aagcagctgcccaatggagactggccacaggagaacatttctggagtgttcaataaaagc
tgtgccattagctacacctcttacaggaatgtgtttcctgtgtggacattgggacggttc
tcacggctttacccctgcagctcactggctgggaaactcaaaccatga
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