KEGG   Pimephales promelas (fathead minnow): 120461560
Entry
120461560         CDS       T08155                                 
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
  KO
K15623  protein SSXT
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120461560 (ss18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pprm03036]
    120461560 (ss18)
Chromosome and associated proteins [BR:pprm03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    120461560 (ss18)
   GBAF(ncBAF) complex
    120461560 (ss18)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 120461560
NCBI-ProteinID: XP_039505729
LinkDB
Position
Unknown
AA seq 368 aa
MSVAFAQHRQRAKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSHYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMNQSGATPQLPHGHSMPPEGPPAPHMQNQMNGQIPG
PNHMSIQGPGPNQTPSIPSGSMNMPASSHGSMGAYNHAVPSSQGLQSQGQMNMSQGQPMG
NYGPRPNMNMQPNQGPIMHQQAPSQQYNMPPSGGGGQHYQGQQNPMGMMGQGNHVMGQRP
MPPYRPPHQGPPQQYAGQEEYYTEQYSHGGQGAPEGNAQYGQQQEAYQQGPPQQQGYPPQ
QQYTGQQGYPGQQQAYGPSQGAPSQYPNYPQSQGQQYSAYRPPQPGPPQGQPQRPYSFDQ
GQYGNYQQ
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgtctgtggctttcgcacagcaccggcagcgcgccaagggcgatataacgcctgccggg
atacaaaagttactggatgaaaacaatcagctgattcagtgcatcatggacttccagagt
aaagggaaaacggctgaatgttcacactaccaacagatgttacacagaaatctggtgtat
ctggccacaatagcagactctaaccagaacatgcagtctctgcttcccgcgccgcccact
cagaacatgcccatgaatcaaagtggcgcgactcctcagctgccccatggccacagtatg
ccccccgaggggccgcccgccccacacatgcagaaccagatgaacggacagataccaggt
ccgaaccacatgtccatacagggccccggacccaaccagacgcccagcatacccagtggc
tccatgaacatgccggccagcagccatggctccatgggggcgtataaccacgcagtgccc
tcatcgcagggcttgcagtcacaggggcaaatgaacatgagccaggggcagcccatgggt
aattacggccctcggcccaacatgaacatgcagcccaatcaggggcccataatgcaccag
caagctccttcccaacagtacaacatgcctccttctggtggaggtgggcagcattaccag
gggcagcagaaccccatgggcatgatgggacaaggcaatcacgtgatggggcagaggccc
atgcccccctacaggccgccacatcaaggacctcctcagcaatatgctggtcaagaggaa
tactacacggagcaatacagtcatggaggacagggagcaccagagggaaacgcacagtat
ggtcagcagcaagaggcgtatcagcagggtccgccgcagcagcagggttacccgccgcag
cagcagtacaccggacagcagggataccccggacaacagcaggcctatggtccgtctcag
ggcgctcctagtcagtacccaaactacccccagagccaagggcagcagtattcagcctac
agacccccacagcccggcccaccacagggacagccacagcgcccctactcgtttgaccag
gggcagtatggcaactaccagcagtag

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