Pimephales promelas (fathead minnow): 120461560
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Entry
120461560 CDS
T08155
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120461560 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120461560 (ss18)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120461560 (ss18)
GBAF(ncBAF) complex
120461560 (ss18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
120461560
NCBI-ProteinID:
XP_039505729
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MSVAFAQHRQRAKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSHYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMNQSGATPQLPHGHSMPPEGPPAPHMQNQMNGQIPG
PNHMSIQGPGPNQTPSIPSGSMNMPASSHGSMGAYNHAVPSSQGLQSQGQMNMSQGQPMG
NYGPRPNMNMQPNQGPIMHQQAPSQQYNMPPSGGGGQHYQGQQNPMGMMGQGNHVMGQRP
MPPYRPPHQGPPQQYAGQEEYYTEQYSHGGQGAPEGNAQYGQQQEAYQQGPPQQQGYPPQ
QQYTGQQGYPGQQQAYGPSQGAPSQYPNYPQSQGQQYSAYRPPQPGPPQGQPQRPYSFDQ
GQYGNYQQ
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggctttcgcacagcaccggcagcgcgccaagggcgatataacgcctgccggg
atacaaaagttactggatgaaaacaatcagctgattcagtgcatcatggacttccagagt
aaagggaaaacggctgaatgttcacactaccaacagatgttacacagaaatctggtgtat
ctggccacaatagcagactctaaccagaacatgcagtctctgcttcccgcgccgcccact
cagaacatgcccatgaatcaaagtggcgcgactcctcagctgccccatggccacagtatg
ccccccgaggggccgcccgccccacacatgcagaaccagatgaacggacagataccaggt
ccgaaccacatgtccatacagggccccggacccaaccagacgcccagcatacccagtggc
tccatgaacatgccggccagcagccatggctccatgggggcgtataaccacgcagtgccc
tcatcgcagggcttgcagtcacaggggcaaatgaacatgagccaggggcagcccatgggt
aattacggccctcggcccaacatgaacatgcagcccaatcaggggcccataatgcaccag
caagctccttcccaacagtacaacatgcctccttctggtggaggtgggcagcattaccag
gggcagcagaaccccatgggcatgatgggacaaggcaatcacgtgatggggcagaggccc
atgcccccctacaggccgccacatcaaggacctcctcagcaatatgctggtcaagaggaa
tactacacggagcaatacagtcatggaggacagggagcaccagagggaaacgcacagtat
ggtcagcagcaagaggcgtatcagcagggtccgccgcagcagcagggttacccgccgcag
cagcagtacaccggacagcagggataccccggacaacagcaggcctatggtccgtctcag
ggcgctcctagtcagtacccaaactacccccagagccaagggcagcagtattcagcctac
agacccccacagcccggcccaccacagggacagccacagcgcccctactcgtttgaccag
gggcagtatggcaactaccagcagtag
DBGET
integrated database retrieval system