Pimephales promelas (fathead minnow): 120461567
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Entry
120461567 CDS
T08155
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03020
RNA polymerase
pprm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120461567 (polr2d)
09124 Replication and repair
03420 Nucleotide excision repair
120461567 (polr2d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120461567 (polr2d)
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120461567 (polr2d)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
120461567 (polr2d)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120461567 (polr2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Tfb4
Motif
Other DBs
NCBI-GeneID:
120461567
NCBI-ProteinID:
XP_039505740
LinkDB
All DBs
Position
Unknown
AA seq
141 aa
AA seq
DB search
MAAGGATQVGDVEEDASQLMFPKEFENSETLLNSEVHMLLEHRKQQNESAEDEQELSEVF
MKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSVEGR
FEDDELQQILDDIQTKRSFQY
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggaggagcgacgcaagtgggcgatgtggaggaggacgcgtcgcagctcatg
tttcctaaagagttcgagaactcggagacgctgctgaactcggaggtccacatgttgctg
gagcatcgcaagcagcagaacgagagcgcggaggacgagcaggagctgtccgaggtcttc
atgaagaccctcaactacaccgccaggttcagccgcttcaagaacagagagaccatcgcc
agtgtgcgcagcttacttctgcagaagaagcttcacaagtttgagttggcaagtttagcc
aatctgtgtcccgaggctgcagaggaggccaaagccctcatcccaagcgtggaaggccgg
tttgaagatgacgagttacagcaaatcctggatgacattcagacgaaacgcagcttccag
tactga
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