Pimephales promelas (fathead minnow): 120461590
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Entry
120461590 CDS
T08155
Name
(RefSeq) sorting nexin-4-like
KO
K17919
sorting nexin-4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120461590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120461590
Membrane trafficking [BR:
pprm04131
]
SNARE
SNARE associated proteins
Others
120461590
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
120461590
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
120461590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
Vps5
Motif
Other DBs
NCBI-GeneID:
120461590
NCBI-ProteinID:
XP_039505746
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MADSGSEDIAVIGNTDLTPSESENNLKNTMVEKGTSLLKRMEISVAEAEKRTGKNAVNMQ
ETYTVYLIETRPVDAASEGTNPVPDSLWRRYSEFELLRNYLLVAYPFVVVPPLPEKRAEF
VWHKLTADNMDPDFVERRRVGLENFLLRVASHPVLSNDKIFYSFLTEENGWKETVFETGF
QAKADSRLKALNATFRVKNPDKRFAEMKHYSDELQSVISQLLRVRARAADRLYGVYKVHG
NYGRVFSEWSAIEKEMGDGLQSAGHHMDAYAASVDDILEEEEHYADQLKEYLFYADAVRA
VCRKHELTQFELEMAAQDLTSKKQQREELATGTVRTFSLKGMTSKLFGQETPEQREAKLK
MLETQIEEGEELVKERNAESDEYVKSAWVDIERFKEQKDHDLREALISYAIMQISMCKKG
IQVWNNAKECFSKM
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcaggaagcgaagatatagcggtgattggaaacacagatctgactccttcg
gagtcggaaaacaacttaaagaacacgatggttgaaaaaggtacaagtcttctgaagagg
atggagatcagtgtggctgaagcagagaagaggaccggcaagaatgccgtcaacatgcaa
gagacttatacagtatatcttatagagacacggcctgtggatgctgcatcagaagggacc
aatcctgtcccagattctctttggaggcgttacagcgaatttgagctccttcgaaactat
ttgttagttgcctatccatttgtggtggttccgccgttgcctgaaaaacgggctgaattt
gtctggcacaagctgacagcagacaacatggaccctgacttcgtggagaggcggagggtt
ggactagagaacttcctgcttcgagtggcctcgcacccagtcttgtccaatgacaagatc
ttctattcattcctcaccgaggaaaatggttggaaggaaaccgtgtttgagacaggattt
caggcgaaggccgattcaagattaaaggctttaaatgccacattcagagtgaagaaccct
gacaagagatttgcagaaatgaaacactacagtgatgagctgcagtctgttatttcacag
ctgctgagagttcgggcgcgagcagctgatcgcctatatggagtctacaaagttcatgga
aattatggaagagtttttagcgagtggagtgccattgagaaagagatgggagatgggctg
cagagcgccggccatcacatggacgcgtatgctgcttctgtagatgatattctagaggaa
gaggagcattacgctgaccagctgaaggagtaccttttctatgcagacgcagtaagggca
gtgtgtaggaagcatgaactgacacagtttgaactggagatggccgcccaggatctgacc
tctaagaaacagcagcgggaggaactcgccactgggacggtacggaccttctctctgaag
gggatgaccagtaaactgtttggacaagagaccccagagcagagagaggccaagctgaaa
atgctggagacacagattgaagaaggagaggaactggtcaaagaaagaaatgcagaaagc
gacgaatatgtgaaaagtgcatgggtggacattgaaaggttcaaagagcagaaagaccat
gatctcagagaggctctcatcagctatgccatcatgcagatcagcatgtgcaagaaggga
attcaagtgtggaacaatgctaaagagtgcttcagtaagatgtga
DBGET
integrated database retrieval system