Pimephales promelas (fathead minnow): 120461731
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Entry
120461731 CDS
T08155
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3 isoform X1
KO
K06247
laminin, gamma 3
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04510
Focal adhesion
pprm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120461731 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120461731 (lamc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
120461731
NCBI-ProteinID:
XP_039505921
LinkDB
All DBs
Position
Unknown
AA seq
1403 aa
AA seq
DB search
MLCCVCFSCHRCFIDRCILTKRKGANDRKCKCKCNGHASHCMTNEEGSLVCACEHNTAGV
DCQHCAPFYQERPWARATADSANQCVKCNCSGLADECVFDAEQYRSTGSGGRCVGCRENT
AGPHCERCRENFFRSLPQQPCQDCNCNAMGSVSLQCDAEGVCVCRPGVSGIKCDICKPGF
HSLGPDGCRLCKCDDRGSEGVCSAEDGHCYCKNNVEGQSCNRCKPGSFNLQLDNPDGCKK
CFCFGHSLACSSSNQYMAMNITSDFLEDPDGWKGVFSEGHEQSLIWKEGEVYLLPYREEN
GFYKAPDKYLGNILLSYGRPLSVTFTAELEELLPRSVTVMMEGSGILVSADLYSKQDPYS
PLEKTPTNTFTLRLTEKDVIPSIASFEFLRMLYNLTALYISNAGGQNYTSQLSRVTLESA
DQTTYQPDADAPWVEVCSCPTGFTGQFCELCAPGSTRETPNGGPFSPCIPCNCNQHGTCH
PETGVCDCTDFTTGRYCERCEDGYYGNALIGSSGDCLPCPCPDRTTCAQVPETGDVVCTN
CPRGQRGVRCELCEDGYYGSPLGWGGTVQPCVMCECNGNVDPNAVGVCDHMTGRCLKCLG
HTTGDHCEKCRSGYYGNALAKDLNPERKCKPCACNVAGTSGSLNDCQSDTGHCVCLSHVI
GRDCGQCESGYFNLQPGLGCEMCNCNPIGSSSSACHPVTGQCMCRTGVLGVSCDTCRMGF
FGFSSRGCRACNCDPMGSTSMQCHDNGTCSCRHGFVGYKCDKCELNYYQNRLTHQCEECP
VCYSLIRDQASKLKARLLDLETLLSGYDCNRYSRQYRGRQQHRHQHNGLDNHIQKDQVED
YLPNALEDLLAIQEAREAFIKQFSQLETSAQTLQLQLHSIAIALNCNLTDSGKESEKGKT
LKGENECQELLDTLSAALNMQDQLQKMTLDLNSMVIPSVIPKEPNKWNAIVNESEVLVKS
HTDMAAYIEQTAGDAFKMANRTYSQLIILLEDNSTESHVQDLTEKLEEMQQLKENLTLGV
NETLVTHLSLQRHNSEIAAILENITASLSELRTTEGNFTLAEEEFIITSFSKMFNQTNVT
ANQDTELTKSEDLMNRTTELDASVQSKELMINMTIEEIQPHVDSAEKHLKTVQELKELTA
AAEGFKVSAVSSVVTGKEVEAEFLSLQKVLEDMEQDWPRLPTLSKGYLKREKLLKEKTLV
DVKKKVKQTEKMIKPAVENATAASSTAKQAKESADAVAKDAKASLTQGKRAKHASGQLRS
AVDITMEQLTELESQSVQKQETMEAEEDMVSSRSVINKMETAKKQLESFTNTLTLLLKQL
EANVVLENYDRILNETASRLHVLQAAVESPSLTGKIQMLRTAAHDQEKQLQNLEQNLQDI
REERDSLTDIAQNLPKTCPQKGH
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgttatgttgcgtgtgttttagctgtcaccgatgtttcattgacagatgtatactgacc
aagagaaagggagcaaatgacagaaaatgcaaatgcaagtgtaatggccatgccagtcac
tgcatgaccaatgaggagggtagtttggtgtgtgcttgtgagcacaacactgcaggggtc
gactgtcagcactgcgctcccttctaccaagaacggccatgggcacgggccaccgctgat
tcagccaaccagtgtgtgaagtgtaactgcagtggtcttgctgatgaatgcgtgttcgat
gctgagcagtaccgcagcacaggaagtggggggcgctgtgttggctgcagggaaaacaca
gctggccctcactgtgagcgatgtagagagaacttctttagatcattaccgcaacagccc
tgccaagactgcaactgtaatgcaatgggctctgtgagtttacagtgtgatgcagaggga
gtgtgtgtgtgtcggccaggtgtgtctggtataaagtgtgacatttgcaagcctggcttc
cattctctcggccctgatggatgcaggttgtgcaagtgtgatgacaggggcagtgaagga
gtgtgttcagctgaagatgggcactgctattgcaagaataatgttgagggccagtcctgc
aacaggtgtaaaccaggctccttcaacctccagctggataacccagatggctgtaagaaa
tgtttttgttttggacactccctcgcctgttcatcctccaatcagtacatggctatgaat
attacttcagacttcctagaagatccagatggctggaagggtgtgttctcagaagggcac
gaacaatccctcatctggaaggagggggaagtctatctattgccctacagagaggagaat
ggcttttacaaagcacctgataaatatctggggaacattttgttaagttacggacggccc
cttagcgtgacatttacagctgagctggaggaactcttgcccagaagtgtgaccgtgatg
atggagggctctggaatattggtttctgctgatttgtactctaaacaggatccttattct
ccactggagaagacacccaccaacaccttcactctcaggttaacagagaaggacgtgatt
ccatctatagcctcatttgagtttctccgaatgctttacaatctaactgctctatacatc
agcaacgcagggggccagaactacacctctcaactttccagggtaacccttgaatctgca
gaccagacaacctaccagcctgatgctgatgctccatgggtggaagtgtgtagttgtccc
acaggattcacagggcagttctgtgaactctgtgctcctggatccaccagggaaactcct
aatggtggacccttctccccatgtataccttgcaactgcaatcaacatgggacctgccat
cctgagacaggtgtgtgtgactgcacagacttcaccaccggccgttattgtgagcgttgt
gaagatggttactatggcaatgcactgattggcagctcaggcgactgcttaccttgtcct
tgtccagatcgcaccacctgcgcccaggtgccagagacgggggacgtggtttgtaccaac
tgtccgagaggccaaaggggtgtacggtgtgaattgtgtgaagatggttactatggaagc
cctctgggctggggtggcacagtgcaaccgtgtgtgatgtgcgagtgtaatgggaacgtg
gatcccaacgctgtgggcgtgtgcgatcacatgactggacgctgtctgaaatgccttgga
catacgactggggaccattgtgaaaaatgcagatcaggttactacggcaacgctttggcc
aaggacctcaatccagagcgaaagtgcaaaccttgtgcctgtaacgtggctgggacatct
ggttccctgaatgactgccagtcggacacaggacattgtgtttgcctaagtcatgtgatc
ggaagagactgtggacagtgcgaatctggctacttcaacctgcagccaggcttgggctgt
gagatgtgtaactgcaatcccattggctcctcctcttcagcatgtcatccagtcacagga
cagtgcatgtgtcgaactggtgttttgggggtgtcatgtgacacttgtcgaatgggattc
ttcggtttctcctctagaggctgcagagcatgtaattgtgaccccatgggctcaacctca
atgcagtgccatgacaacggtacgtgttcttgtcgccatgggtttgtcggctataagtgt
gacaagtgtgaactgaactactaccagaaccgcctgacccaccaatgtgaggagtgccct
gtgtgctacagtctcatcagagaccaggccagtaaactgaaagccagactgctggatttg
gagacgctgctcagtggttatgactgcaatagatacagtcggcagtatcgtgggcgccag
cagcacaggcaccaacataatgggctggacaatcatatacagaaggaccaggttgaagac
tatctgcccaatgcattggaggacctccttgctattcaagaagctcgtgaggccttcatt
aagcagttctcacaattggaaacatctgcccagaccttacagctacagctgcatagcatt
gcaatagcgcttaactgcaatttgacagacagtggaaaagaatcagagaaaggaaagact
ctaaagggtgaaaatgagtgtcaagagcttcttgacactttatccgctgctctgaatatg
caggaccagcttcagaagatgactcttgaccttaacagcatggtcatcccttctgtaatc
cctaaagaaccaaacaaatggaatgccatagtgaacgaatctgaggtgctagtgaaaagt
cacacagacatggcagcttatatagagcagacagcaggggatgcctttaaaatggctaac
agaacctattcacagctgatcattctactagaagacaactccacagagtctcatgtacag
gatctcacagagaagctagaggagatgcagcagttaaaggagaatctgactcttggggtt
aatgagactttagtgacacatctgtcacttcagaggcacaactctgagatagccgccatt
ttagagaacatcactgcttcactatcagaactacgcacaacagaaggcaatttcaccctt
gcagaggaggagttcattataacatctttctcaaagatgtttaatcaaacaaatgtcaca
gcaaaccaggatacagaacttacaaagagcgaggacctgatgaacaggacaaccgagttg
gacgcttctgttcagtcaaaagagctcatgataaatatgactatagaggaaattcagcct
cacgtggacagtgctgaaaaacacctgaaaactgttcaagagctcaaagagctgacggct
gcggctgagggatttaaggtgtcagccgtctcctctgtggtgacagggaaagaggttgag
gcggagttcctgtctctacagaaggttctggaagacatggaacaagactggcctcggctg
cctacactcagcaaagggtatctgaagagagagaagttgctgaaagagaagaccctggtg
gatgtgaaaaaaaaagtcaagcagacggagaaaatgatcaaacctgctgtggaaaacgct
acggctgcgagcagcacagctaaacaagcaaaggagtctgcagatgcagtggctaaagat
gccaaggcatctctcacacaggggaaacgggcaaaacatgcatctggacagttgcgttca
gctgtggacatcaccatggagcagttgactgagctggaaagccaatctgtgcaaaaacag
gaaaccatggaggcagaggaagacatggtttcttcaaggagtgtgataaacaaaatggag
acagccaagaagcagctagagtcttttacaaacacgctaactctgctccttaaacaactg
gaagctaatgtggtgctggagaactacgatcgtatcctgaatgagaccgcatcccgtctt
catgttctccaggcggctgtggagagtccgtctctcactggaaagatccagatgcttcgt
accgcagcacacgatcaagagaaacaactgcaaaatcttgaacagaacctgcaggacata
cgagaagagagagacagtctgacagacatcgcccagaacttgcccaaaacatgcccacaa
aaagggcactga
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