Pimephales promelas (fathead minnow): 120461746
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Entry
120461746 CDS
T08155
Symbol
dpf2
Name
(RefSeq) zinc finger protein ubi-d4 isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120461746 (dpf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120461746 (dpf2)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120461746 (dpf2)
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120461746 (dpf2)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120461746 (dpf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
zf_RING_Vps8
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
120461746
NCBI-ProteinID:
XP_039505941
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MAAVVENVVKLLGEQYYRDAMEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYFWMEKR
HRGPGVAPGQLYTYPARRWRKKRRALPPEDLRLAFPSLKPELDLGLKKDIFSSDGSSLEA
LLKGEPLDKRSGLELRTGEEEPSSTELSTGALNSSSRVRKRILEPDDFLDDLDDEDYEED
TPKRRGKGKGKGRGGVSSARKKLEAAAALEDRDRPYACDNTFKQKHISKSSERVCGKRYK
NRPGLSYHYAHSHLAEEEGEEKDEMDIREPTPPQQDEPKTPKKGPDGLALPNNYCDFCLG
DSNLNQKTGQSEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSEN
DDQLLFCDDCDRGYHMYCLSPPMSEPPEGSWSCHLCLALLKEKASIYQNQNAPPL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggtagagaatgttgtcaagctgctgggtgagcagtattacagggacgct
atggagcagtgtcacaactataatgcccgtctgtgcgcagagaggagcgtgaggatgcct
ttcctcgactctcagacaggtgtcgcccagagcaactgctacttctggatggagaaacga
cacaggggaccaggtgttgccccaggtcagctatacacttatccagcacgtcgctggaga
aagaagaggagagctctccctccagaggaccttcgtctagccttcccatctctaaagccc
gagctggatctggggcttaagaaggacattttctccagtgatggaagcagcttagaggct
cttctgaaaggagagccactggataaaaggtcagggttggagctccgcacaggagaggag
gagcccagctctacagagctctccaccggggcactaaactccagcagcagggtccgaaag
agaattttggagccagatgattttctagatgatcttgacgacgaagattatgaggaagat
actccgaagagaaggggaaaaggcaagggaaagggtcgtggtggtgtcagcagcgctcgg
aagaagttggaagcagcagcagctttggaagatcgggacagaccgtacgcctgtgacaac
actttcaaacaaaagcatatttcaaaatcttccgaaagagtctgtgggaagcgctataag
aacaggcctggtctcagttatcattacgcccactctcacttggccgaggaggagggggag
gagaaagatgagatggatattcgcgaaccaactccaccccaacaggatgaaccaaagact
ccaaaaaagggcccagacggtttggctctgccgaacaactactgtgatttctgtttggga
gattccaacctgaaccagaaaactggccaatcagaagagcttgtgtcctgctcagactgt
ggtcgttctggtcacccttcatgtctgcagttcactcctgtgatgatggctgctgtgaaa
acctatcgctggcagtgcattgaatgcaaatgctgtaacatatgtggaacatcagaaaat
gatgaccagctattgttctgtgatgattgtgaccgaggttatcatatgtactgcctctcg
ccccccatgtctgaacctcctgaaggaagctggagttgtcatctgtgtttggccctcttg
aaagaaaaggcctccatataccagaatcagaatgctccgcccttgtga
DBGET
integrated database retrieval system
