Pimephales promelas (fathead minnow): 120461765
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Entry
120461765 CDS
T08155
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120461765 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120461765 (zgc:163098)
Spliceosome [BR:
pprm03041
]
Complex A
U2 snRNP components
U2 related factors
120461765 (zgc:163098)
Complex B
120461765 (zgc:163098)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
CID
cwf21
CTK3
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
120461765
NCBI-ProteinID:
XP_039505975
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MADKKGKSVGVKRTLTKREQEDMKKKEEEKAAEVFEEFLASFDTNDKSGVKTFVRGGIVN
ATKEEEAAEVKKSKLYRPASKFNSPPQNASPVQPTEVKKAAAKKKTEEKKKSNLELFKEE
LKQIQEEREERYKRKKGDSGVYPDLDLPLTRRSSNSDEHTPHVSLYKPIGNLKPFLYIVF
AVFDDDPAVPNTTNLYIGCINPKMTEEMLCKEFGKYGPLASVKIMWPRTDEERTRVTNRG
FVAFMTRKDAERALAALDGKTVMGFEMKLGWGKAVRIPPQPLYTPIGVLKTTAPPPPSGL
PFNAQPRDRFRNDFTKPRSRSQEDFYKTLSEAVVTVVIPPERNLLGLIHRMIEFVVREGP
MFEAIIMNREKNNPEFRFLFDNKTQEHVYYRWKLYSILQGENPNKWRTSPFRMFRGGSLW
KPPLLNPYLHGDEEIEELSFPSQEEEPKKGQLKAEHRERLEALLRGLTPRRDEIGDAMLF
CLERAEAAEEVVSCITESLSIVHTPLQKKIARLYLISDILYNSCAKVANASYYRKFFETK
LPQIFGDISEAYRNIQARLQAEQFKQRIMGCFRAWEDWAVYPDSFLIQLQNIFLGLIKPG
EEVIERAEPESPDLDGAPLDGIPLDKVEIDGTPLDDLDGSPMTWDPSSIDGVPVDDIDGV
PLGNSIDDIDGVPFDEGSDKSLPTVALSKWEKVDSESSAKNDSDTEMSLSGLKENNGDSD
ISSDEADSPSRYEGAEFKSSLKNFELSESKRTRLRELEVKVMNFQDELESGKRQRKSSMN
LQQQVQHYRNRLLQKEFDKDDQEKKDKYSQKSKDRSKKDERRDKEDRSKTRDKEKSRKSE
DRERSRGKSRDKEERRERTKSRSPRKSKRSQSPSPQHKSWRSSSRSPHRSHKKTKKSKH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaaaagggaaatcagtgggggtgaagagaacactaacaaaaagagaacaa
gaggacatgaagaaaaaggaggaggagaaagctgctgaagtctttgaggaatttttagct
tcttttgacactaacgacaaaagcggagtgaagacgtttgtacgaggaggcattgtcaat
gcaactaaagaggaagaagccgcagaggtgaagaagagcaaactctacagacccgcctct
aaattcaattctccacctcagaatgcctcacctgttcaacctacagaagttaaaaaagct
gcagctaaaaagaagactgaggagaagaagaagagtaatctggagctttttaaagaggaa
ttaaaacaaatacaggaggaaagagaggagcgatacaaaagaaagaaaggggactctgga
gtgtacccagatctggatttacctctgacacgaagatcaagtaattctgacgaacataca
ccacatgtttcactttacaaacccattggaaacctaaaaccttttttatatattgttttt
gcagtatttgatgatgatcctgcagtgccaaacacaacaaacctgtacatcggctgcatc
aaccccaagatgacagaagagatgctctgtaaggagtttggaaaatacggccctctggcc
agtgtaaagatcatgtggcctcgcactgatgaggagagaacgagagtcacaaaccgtggc
tttgttgctttcatgacacggaaagatgcagagcgtgctctggctgcgctggacggtaaa
acagtaatgggttttgaaatgaaactgggttgggggaaggcagtacgtattcctccgcaa
cctctttacaccccaatcggggtgctgaagaccactgccccccctccaccctctggactg
ccattcaacgcccaacccagagaccgcttcagaaatgacttcaccaaaccacgcagtcgc
tcgcaggaagacttttacaagactctgtccgaggccgtagtgacagtggtaatcccccca
gaaaggaacctgctgggcttgatacacagaatgattgagtttgtggtaagagagggtccc
atgtttgaagccatcatcatgaaccgggaaaagaacaaccctgaattcaggtttttgttt
gataataagactcaggagcatgtgtactacagatggaagctctactccattctacaggga
gaaaacccaaataaatggagaacgtcccctttccgaatgtttaggggtggctctctttgg
aagcccccactccttaacccatatctccatggcgatgaggaaatagaagagctctccttc
ccttctcaagaggaagagccaaagaaagggcaactgaaggcagagcacagagagcggttg
gaagccctgctgagaggactgactcctcgcagagatgaaatcggtgatgcaatgctgttc
tgcctagagagagcggaggctgctgaggaggtcgtctcctgcatcactgaatctctgtct
atagtgcacacaccactgcagaagaagattgccagactttacctgatatccgacatcctc
tacaactcctgtgccaaagtggccaatgcatcatattaccgcaaattttttgagacaaag
ctgcctcagatatttggagacatcagtgaagcgtatcggaacatccaggctcgactccag
gcagagcagtttaagcaaaggatcatgggatgttttcgtgcatgggaggactgggcagtt
tatccagactccttcctgatccaactgcagaatatattcctgggactcattaaacctgga
gaggaagtcattgaaagagcagagcccgaatctcctgatctggatggagcgccgttggat
ggtattcctctagacaaagttgaaattgatggtactccccttgatgaccttgatgggtca
cctatgacctgggatccatcctctatagatggtgtaccagttgacgacattgacggtgtt
cctctaggaaactcaatagatgatattgatggtgtgccatttgacgagggctcggataag
agtttacccactgttgcactatccaaatgggagaaagtggattcagaatcctcagctaag
aatgactcagacactgagatgagtttaagtggcctaaaggagaacaatggcgattctgat
atcagcagtgatgaagctgacagccctagcaggtacgagggggcagagtttaagagttct
ctgaaaaattttgagctgtctgaaagcaaaaggacacgtctccgggaattggaggtgaag
gtgatgaatttccaggatgagttggagtcgggtaagcgacagaggaaatccagtatgaat
ctacaacagcaagttcaacactacagaaacagactgctacagaaggagtttgacaaggac
gaccaggaaaagaaagacaaatattcacagaaatcaaaagatcggtccaaaaaagatgag
cggagagataaagaagaccgaagtaaaacacgggacaaagagaaaagtagaaaaagtgag
gacagagaaaggagtcgaggaaagagtcgagacaaagaagagaggagagagagaacaaaa
tctcgatcaccacgaaagtcaaaacgctctcaatcaccatcaccacagcacaaatcctgg
aggtcttcatcccgatcaccacatcgctcgcacaaaaagaccaagaagagcaaacactga
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