Pimephales promelas (fathead minnow): 120461833
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Entry
120461833 CDS
T08155
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120461833 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120461833 (trpv1)
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120461833 (trpv1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
Ank_4
DUF4668
Motif
Other DBs
NCBI-GeneID:
120461833
NCBI-ProteinID:
XP_039506076
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MSKQKNSSTSSFTLETDDLTEEERSTPKQIKKSDKRPMDSNYLDDIQEPTKPTIKFNLNF
DKGIRKVKEEPAQQDSGRFTIKRLFEAVSSGEVAKLQGLHLYLHKNMKRLTDSQYMSNGK
TVLLKALLNLRKGENDTIEHLLDIAEKLGDLKKFVNAAYTDSFYKGQTALHVAIERRSLK
FVQMLVKKGADVHAKACGKFFQPNQETCFYFGELPLSLAACTNQPDIVDFLMDNPYQAVD
VRERDSHGNTALHALVSIADNSPENTEFVIAMYDHILIKSYQLHPKIKLEEIENNKGLTP
IQLAAKTGKLKLFKHIVQREFKGCRHLSRKITEWAYGPVCSSLYDLGSLDTYEKNSALEI
IVYGSEIPNRHEMLHIEPLNRLLEEKWDRFAQWMFMFKFIVYIIYLSIFTAVAYNREEGI
DLSNNESLTPPFPYVKDTQGYLLQTGQIITLIGALYFFIRGLIDMYRKRPRFQSLVIDGY
SDQLFFLQAVLLLVSAVLYCFGQNEFLAFLVLSLALSWVNLLYFFRGSKHMGIYSIMIQK
MILGEIRRFLVVYMVFLIGFSAAVVTLLKKKTTNTKNRSFFDEDCKTSTDIGVITMELFK
FTIGMGDLQFSGDSRYPEVFYVLLILYIVMTYILMLNMLIALMNQSVDEMSIESTSIWKL
QRAITILDMEWMLPLCLKTKLRSGEQKDLGGGKEPDLRWCFSVEEVNWNQWNRNMGIINE
DPGKCTSLPSPTKPQREPSQRGLLQTFSKRWTQRVPHRDVQELDPLAEASTSV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaaaaaaacagcagcacctcatcgttcactctggagacggatgacctgaca
gaggaggagaggtcaacgcccaaacagataaagaagagtgacaagaggcccatggattct
aactacctggatgacatacaggaacctacaaaacctacaattaaatttaacctaaacttt
gacaagggaatcagaaaagtaaaagaggaaccggctcaacaggacagtgggaggtttacc
atcaagcgtctgtttgaggccgtgtccagtggcgaggtggcgaaactgcagggtttacat
ctgtacctgcacaaaaacatgaaacgcctcaccgactctcaatatatgtccaatggaaag
acagtcctgctgaaagcgcttttaaatttgaggaaaggcgagaatgacactattgaacat
ctgctggacattgcagagaaactgggagatttaaaaaaatttgtcaacgctgcttacaca
gacagtttctacaaaggtcagacagcactccatgttgcgattgaaaggaggagtcttaaa
tttgtacagatgctggttaagaaaggggccgatgtccatgctaaggcctgtgggaaattc
tttcaacccaatcaagaaacgtgcttctattttggtgagttgcccttgtcgctggccgct
tgcactaatcagccagacattgtggacttccttatggacaacccttaccaggcggtggat
gtcagggagagagactctcatgggaacacggcgcttcacgcactagtatccatagctgat
aatagtcctgaaaacacagagtttgtcattgccatgtatgaccacatcttaatcaaatcc
taccaacttcaccccaagatcaaactggaggaaatcgaaaataataaaggactcacacca
atccaactagctgccaaaacaggaaaattaaagctgtttaagcacatcgtccagcgggag
tttaaggggtgcagacatctgtcccgcaagatcacagaatgggcctacggtcccgtgtgc
tcgtctctgtatgacctcggctcccttgacacctacgagaagaactccgcactggaaata
atcgtttatggcagtgagattcccaatcgccacgagatgctccatattgagccattgaac
agactacttgaagaaaagtgggatagatttgcgcaatggatgttcatgttcaaatttata
gtttatattatctatctatctatcttcactgctgttgcatataaccgcgaagaggggatt
gacctcagtaacaacgaatcattaactcccccgtttccttatgtaaaagatactcaaggc
tacttgcttcagacagggcagatcataactctcattggagcactatacttctttattaga
gggttaatagatatgtataggaagcgtccgagatttcagtccctggtcatagacggatat
agcgatcagcttttttttctgcaggccgtgcttctcttggtctcagctgtattgtactgc
tttggtcagaatgaatttctggcctttctagtgctgagtcttgccttgagctgggtaaac
ctactttatttcttcagagggtccaaacatatgggcatctacagtatcatgatacaaaag
atgattcttggagaaattcgtcgattcctggttgtgtacatggtcttcctcattgggttc
tctgcagctgtggtcactctccttaaaaaaaaaactaccaataccaagaatcgatctttt
tttgatgaggactgcaagacgtccacagacatcggcgtcatcactatggagttgttcaag
tttacaattggcatgggagatctgcagttctctggggattctagatatccggaggtcttc
tatgtgctgctgattctgtatatagtgatgacatacattctgatgctgaacatgctgatc
gctttgatgaatcaaagcgtggatgagatgtccatagagagcactagcatctggaaacta
cagcgtgcaatcaccatcttggacatggagtggatgcttcccctttgtctgaagacaaag
cttcgctcaggggaacagaaggacctgggcggagggaaagagcctgatctacgctggtgc
ttcagtgtggaggaagtcaactggaaccaatggaacagaaacatgggtataattaacgag
gatcctgggaaatgcacaagtttaccgtccccaactaaacctcagagagagcccagtcag
cgtggactcctacaaacattcagtaagcgctggacacagagggtaccccacagagatgta
caggagctggatcctcttgccgaagcctctacctccgtctga
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