Pimephales promelas (fathead minnow): 120461860
Help
Entry
120461860 CDS
T08155
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120461860 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprm01009
]
120461860 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120461860 (ncor1)
Protein phosphatases and associated proteins [BR:
pprm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120461860 (ncor1)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
120461860 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
120461860
NCBI-ProteinID:
XP_039506106
LinkDB
All DBs
Position
Unknown
AA seq
2441 aa
AA seq
DB search
MSSSGFPPSQGSFSSEQSRYPPHSVQYTFSSSRHPTEFSVPDYRSPLQDQQRRRPSLLSE
FHPGTERPPERRHGYEHQFHTLSAQQDQETLEAKRPRIENVSETHFTRAQPTSILLAPAH
TIQDTIRTTGEVKKETQFSVKVETSSPGGVPQVGEDADTSPSKLSKEELIQSMDRVDREI
AKVEQQIFKLKKKQQQLEDEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKAEEAHK
ILEGLGPKVELPLYNQPSDTKVYHDNIKTNQIMRKKLILFFKRRNHARKQREQKICQRYD
ELMTEWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGTGLSAT
IARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDPMKVYK
SRQFMNVWTEHEKEIFKEKFMQHPKNFGLIASYLERKCVSDCVLYYYLTKKSQNYKTLVR
RNFGNRRNRRNQQITRPSQEDKTDEKNEEDKSEKSEKKEDEEKKEEEEKDEKEDSKYVSW
DISKDKEKCEGEEEEGKEQSTPRGRKTANSQGRRKGRITTRSMANNEASSVVAEEAPPPP
PEQVLPEPIPSSKPEPVQRPAREAAKPSLAASADTRGAVEAGETSRWTEDEMEIAKKGLV
EHGRNWSAIAKMVGTKSEAQCKNFYFNNKRRYNLDNLLRQHKDSRLGRNRDSSQSDPAPD
EDEESDGPDNSSDTESAPSPSQTDPSKPYDSLTHPNSALDGASDLDVTANKGPVADDKGQ
EPPYGELQVKVEKSPEGGAGDGLPEDERTNLAYEMQIHPKSEPQDVEMTAPNSERGQVQV
KTEPEVKDKEEKQGEQHHSDNDSSATCSADEDVEVEPDRQRLYSLEKPSMLGASGSVVVS
SANLLNMQQLRAATIPPMVSPHSLYPHLAFRYAPLDRDRAQPPRHVSAPFGHSSVSGGPL
SGFAMFQHQIKAVHESVQEDKQRLDQNESDRRPRVTTRSPTVLDREGKPFAYMPYDLKLM
EQETHGGVGRPGSPYRLSPREPSKASPQPDGSNATRYSVPPVLQPAPNQAAQNLSDVRMT
FSRHRPPNIPSPPPLIPTSKPTDKPSFIQGGSISQGTPGTYLPSQTHAVYVPEVVKTTAG
SISLGLPRQQDAAKPGERQTRVSYIKQEECSPRGQSAQAEGLLSRARDYEGVVRGGPIQI
QDMRGPPGKGPEGLTYRGGSITQGTPALTQSSVAVDHLKGTIGKLSTEDLSGPEKSRAEA
HSKAHVIYEGKSGHILSFDAIKNPREGTRSPRMGHDLKRTYDIMEGSPGHPGRDAAPYEG
LISRALPKESQHESKDRSILSGSIMQGTPRTSAEFYDEASKYGKQIKRESPPIRSFEGGI
TKGKPYEGVNTIKATGRSIHEIPRKETQDSRKTPVLEGPIAQGIPLKYESSSGNPLAIKH
NVKSLITSPGKISHSAIEAAERERAKYEDVKASERVRHTNSTSVLRSTHTEVGKAQLSPG
MYDDSNARRTPTYTSTSISRGSPLLRGQEGSITTGKPASHERKSALTPTQRDSIPAKSPV
SGADPHGSHSPFDPHHRPVVPGEVYRTHLAPHMDPSLAFHHRVLEPAAYMFQRQPSPTGY
PNTYQLYTMENTRQTILNDYITSQQMQVIPRPDVARGLSPREPSIGIPYPPTRGIIDLAQ
MPPTILLPHPGGAGSPSLDRITYIPGPQIPFPPRAFNPASISPGHPAHHSASAAIVDRER
ERERERDQRERERAAVEYMRGGPEQPGRPGSRSFLRSTSPSVRSQEGVLQQRPSIFQGTN
TKSVITPLMQMPSQASAAQANSRYNNAADALAALVDAAASAPQMDVAKVKESKHNNSSSR
DDDMMSSRRAAQESQEVERRSMQSPYGDVSLPGGKPSHPVYAEGGGAAGSKEKAPPTKSR
MEEELRTHGKTTITAANFIDVIITRQIAPDKDSRERGSQSSDSSSSMSSSRYEAQGAIEV
ISPANSPALREEKNEGPFPSEKSSQPTTGLRFDISRYRQSEDSGPSAPHQPPSSQADSYG
PVPKTHRIMTLADHISHIITQDFAKSQDPPPSSTSLPSSSSSSSLSSTFQSSGMGGVVGR
VKPPNRYSPENPAPTTHHQRPPSRVSPEKSSDKPRARPGRSPDRGRGLVEGSYEPISPPQ
GYSGLDKQEASMLQSQRREHEVPEQRTDSRSPGSGSYLPSFFTKLESTSPMVMSKKQEIF
RKAEVGNAQPGTEIFNLPAVTSSSSVNPRNHSFSDPASNLGLEDIIRKALMGNMEEKQED
QQQAHLGTGNTSGSMSSISESRQEASPSPNTGSCSGRQKLQSKASSRKSKSPNPGQAYSA
GERPSSVSSVHSEGDYHRQAPTWAWEDRPSSTGSMQFPYNPLTMRMLSSTPPTSMACPSP
SMQSQQQPQGGASGPVAPTRAWEREPPLLSEQYETLSDSDD
NT seq
7326 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttcaggatttccccccagccaggggtccttcagcagcgagcagagccgttac
ccaccacactcagtgcagtacaccttcagctcctcacgccacccgacggagttctcggtt
cccgactaccgttccccactgcaggaccagcagcgccgcagaccttcattactgtccgaa
ttccaccctgggactgagaggccgccggagcgcagacatggttatgagcatcagtttcat
accctctcagctcagcaggatcaggaaactcttgaggccaagcgtccccgcatcgagaat
gtatcagaaacgcactttacaagagctcagcccactagcatcttactggcccctgcacac
accatacaggacaccatcaggaccactggagaagtcaagaaggaaacccagtttagtgtg
aaggtggagacctcatccccaggtggagttccacaggtgggtgaggatgcggacacgtcg
ccctccaaactctccaaagaggagttgattcagagcatggaccgtgtggaccgtgagatt
gccaaggtcgagcagcagattttcaaactgaaaaagaaacagcaacaactggaagatgag
gcagcaaagccagtagagccagaaaagccagtgacgccgccccctgtggagcacaaacat
cgcagcattgtccagatcatttatgatgagaaccggaaaaaggctgaagaagcccataag
atactggaagggttggggcctaaagtggagctgcctctgtacaaccagccctctgatact
aaagtctaccatgacaacattaagacgaatcagataatgagaaagaagctgatcctgttt
ttcaagaggaggaaccatgcacgcaaacagagggagcagaaaatttgccagcggtatgat
gagttgatgactgagtgggagaaaaaagttgagcggatggagaacaacccacgccgtaaa
gccaaagagagccgtacacgggaatactacgagaggcagtttcctgagatccgcaaacag
cgtgagcaacaggaacgcttccagagggtgggccagagggggacaggcctgtctgccacc
atcgcaagaagtgaacacgagatatccgagatcattgacggcctctcggagcaggagaac
aatgagaagcagatgaggcagttgtcagtcattcctccaatgatgtacgattccgagcaa
cggagagtgaagtttatcaacatgaacggtctgatggatgacccaatgaaagtctacaaa
tcccgtcagttcatgaatgtctggaccgaacacgagaaggagatcttcaaggaaaagttt
atgcagcatccaaagaactttgggctgatagcttcatatctggagagaaagtgtgtgtct
gattgtgtgctgtactattatttgactaagaagagtcagaactataaaactcttgtcaga
cgaaattttggaaatcggaggaatcgaaggaatcagcagataacgcgaccttcacaggaa
gacaagacagacgaaaagaacgaagaggacaaatcggagaaatcagagaagaaagaggac
gaggagaagaaggaagaggaggagaaagatgaaaaggaggactccaagtatgtatcatgg
gacatcagtaaagataaagagaagtgtgagggagaggaggaagagggtaaggagcagagc
acgccacgcggccgaaagactgccaacagccaaggccgccgcaagggccgcatcaccacc
cgctccatggccaataatgaggcttcgtctgtggtggctgaagaagcacctccaccgcca
cctgagcaagttttgccagagcccataccctcttctaaacctgaaccagtgcagagacca
gctcgagaggctgcaaaaccctctctcgcagccagcgcagacacgcgaggcgcggttgaa
gctggagagacgtctcgctggacagaggatgagatggagatcgccaaaaaagggctggtt
gaacatggtaggaactggtcagccattgctaagatggtaggcactaagagtgaagctcaa
tgtaagaacttttacttcaacaacaagagacgttacaacctggacaacctgctacggcaa
cataaggattcccggctcggtagaaatcgagactcatcacagagcgatcctgcgcctgat
gaggatgaggagagtgacggtcccgataacagttcggacacagagagtgcaccgtctcca
tctcaaaccgacccctccaaaccttatgactcgctaactcatcccaactcagctctggac
ggcgcatcggacctagatgtcacggcaaacaaaggcccggtggcagatgacaagggccag
gagcctccgtacggcgagctgcaggtgaaagtagagaagagtccagaaggaggtgctgga
gacgggcttcctgaagatgaacgaacaaacttggcatatgaaatgcagatccatccaaag
agtgagccgcaggatgtggagatgactgctcccaacagtgaaagaggtcaggtgcaagtg
aagactgagccggaggtcaaggacaaggaggagaaacagggggagcagcaccactctgat
aatgactctagcgccacctgcagtgcggatgaggatgtggaggttgaacctgaccgacaa
agactttactctctggagaagccgtcaatgctgggcgcttcaggctcagtggtcgtatct
tcagccaatctcctcaacatgcagcagcttcgggccgccaccatcccccctatggtcagt
ccccatagcctctacccccacttagcattcagatatgcccctctggacagagacagggcc
cagccaccccgccacgtttcagctccatttggtcacagcagcgtttctggaggtccattg
agcggctttgctatgttccagcaccaaatcaaagctgtgcatgagtctgtgcaggaggac
aaacagagactggaccagaacgagtctgatcgcagaccacgagtcaccacccgcagcccc
actgtactggacagagaaggtaagccgttcgcttacatgccatatgatctgaagctgatg
gaacaggaaactcatggtggagtgggcagacctggctctccatacagactctctcctcgg
gagcctagcaaagcctcaccccagcccgatggcagtaacgccactcgctatagtgtacct
ccagttcttcagccagcaccaaaccaggctgctcaaaacctttcagatgtccgcatgacg
ttctcccgccacaggccgcccaatattccatctcctccacccctcattcccacctctaaa
cctacagacaagccctccttcattcaggggggctccatttcacagggaacaccgggaaca
taccttccatctcaaacacatgctgtgtacgtaccggaagtagtcaagaccacagcagga
tcgatctcactcggcttgccaagacagcaagatgctgccaaacctggtgagaggcaaacg
agagtgtcttatattaagcaggaggagtgttctccacgtggacagagtgctcaggcagag
ggtctcttatccagagcaagagattatgagggagtagtcagaggaggacccatacagatt
caggacatgagagggccacctggaaaaggcccagagggcttgacgtatagaggtggctcc
attacgcagggaactcctgccctgactcagtccagtgtagcagtggatcacttgaaaggc
actattggtaaactgtccacagaggacctgagcggcccagagaagagccgagctgaagcc
cattctaaagctcacgtcatctacgaaggcaaaagcggacacatcctctcttttgacgct
attaagaaccctagagagggcactagaagcccacggatggggcacgatctcaagcgcaca
tatgacatcatggaggggtcccctggacacccaggacgtgatgcggcaccttatgaaggt
ttgataagcagagcattgccgaaagaaagtcaacacgagtctaaggatcgatccatactc
tcagggtccatcatgcaaggaactccaagaacatctgctgaattctatgatgaggcctcc
aagtatggtaaacagatcaagagggaaagtccacccatacgctcttttgagggaggcatc
acgaaaggtaaaccatacgagggcgtgaacaccataaaggcgacgggccgctcaattcat
gagattccccgtaaggagacccaagatagtcgcaaaactcccgttctggaaggacccatt
gctcagggtattcctctgaagtatgagagcagtagcgggaacccattggccatcaagcac
aatgttaaatctctgattacaagcccagggaagatctcacactctgccatcgaggcggct
gagcgtgagagggccaagtacgaagatgttaaggcatccgagcgcgtccgacacacaaac
tctacgtctgtcctgcgctccacacacacagaggtgggaaaagctcagctcagtccaggc
atgtatgacgacagcaatgcacgcagaacccctacatacacaagcacctccatatccaga
ggatcacccctactgcgagggcaagagggaagtataacaacaggtaaaccagcttctcac
gagaggaagagcgcactgacaccaacccagagagacagtattcccgccaagtcacctgtt
tccggggctgaccctcatggctctcacagcccctttgaccctcaccacagacctgtggta
cctggagaggtgtaccggactcacctggcaccacacatggaccccagcctcgcctttcac
cacagagtcctggaaccagcagcatacatgttccaacggcaaccatcgcctacaggttac
cccaacacttaccagctgtacaccatggagaacactcggcaaaccattctgaacgattac
atcacctcgcagcagatgcaggtcataccgcgccctgatgttgcaaggggactgtcacca
cgtgaaccgtccattggcatcccatacccacctactagaggaataattgatctagcccag
atgccacctaccatcctgttacctcaccctgggggggcaggttccccctccctggaccgc
atcacctacatccctggacctcagatccctttccctcctagggcattcaaccctgcctcc
atatctccaggacatcctgcccatcatagtgccagtgcagccattgtggatagggaacgt
gagagggaaagagagagagatcagagagaaagggaacgcgccgcagtagaatatatgcgt
ggaggtcctgaacagcctggccgaccaggcagccgtagtttcctgcgttccacctcaccg
tccgtgcgatcacaggagggcgtcctccagcagcggccgagcatcttccagggcaccaac
actaagagcgtcattaccccactcatgcaaatgccctctcaagcgtctgcagctcaagcc
aactcccgatacaacaatgcagctgacgcccttgccgccctggtggacgctgctgcctct
gccccgcagatggatgttgcgaaagtcaaggagagcaagcataataacagtagctcccgg
gatgacgacatgatgtcatcacggcgggcagcacaggagtcgcaggaggtggagcgccgt
tccatgcagtcgccatatggggacgtgtcacttcctggtgggaaaccttcccatcctgtg
tatgcggagggtggaggagctgcagggagcaaagagaaagccccacccacgaagtcacgc
atggaggaggagctacgcacacatgggaaaaccaccataactgctgcaaacttcattgat
gtcatcatcacacgccagattgccccagataaggattcccgtgagagaggctcacagagc
tctgactcctccagcagcatgtcatccagtcgttatgaggctcaaggggcaatcgaggtg
atcagccctgctaactctccagccctgagagaagagaagaatgaaggacctttcccatca
gaaaagagctctcagccaaccacaggattgaggtttgacattagccggtacaggcagtca
gaagactcaggaccttctgcaccccaccagcccccctcctcacaagcagacagttatggg
cccgtccctaaaacacaccgcatcatgaccctcgctgaccacatttcacacattattaca
caagactttgccaagagccaggatcctcctccatcatcaacttcgctgccttcctcttca
tcctcctcttcactctcctccacattccagagttctggtatgggaggtgttgtaggtcga
gttaaaccccctaaccgctatagcccagaaaacccagctccaactacacaccaccagaga
ccaccaagcagagtatctcctgagaaatcttccgataaaccaagagccaggccaggcagg
tctcctgatcgaggtcgagggcttgtcgagggcagctatgagcccatttctcctcctcag
ggctattctgggttagataaacaggaggccagtatgctgcagagtcagagacgagagcat
gaggtccccgaacagaggactgactcgcgctccccaggcagtggcagttacctgccctca
tttttcaccaaactggagagcacgtctcctatggttatgtccaaaaagcaggagatcttc
cggaaagcagaagtcggtaatgctcagccaggcacagagatcttcaatctcccggcagta
acatcatcaagcagtgtaaaccctagaaaccactcatttagtgatccagccagtaatctg
ggtctggaggacatcatcaggaaagctctgatgggcaatatggaggagaagcaggaggac
cagcagcaggctcaccttgggactggaaacacttcaggaagcatgagcagtatttcagag
agccgacaggaggccagcccgtcccctaacacaggttcatgctcaggaaggcagaagctt
cagagcaaagctagcagcaggaaatcaaagtccccgaacccaggccaggcgtactctgcc
ggagagcgtccctcttctgtgtcctccgttcattcggagggtgattaccacagacaggct
cccacctgggcttgggaggaccggccgtcatccacaggttccatgcagtttccttataac
cccctgactatgcgcatgctcagtagtacccctcccacctccatggcctgcccatctccc
tccatgcagtcccagcagcagccacagggtggcgcctctggccctgtggccccaacgcga
gcttgggagagagagccaccgctactgtcagagcagtacgagaccctctcggacagcgac
gactga
DBGET
integrated database retrieval system
