Pimephales promelas (fathead minnow): 120461865
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Entry
120461865 CDS
T08155
Symbol
si:dkey-3h3.3
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120461865 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120461865 (si:dkey-3h3.3)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120461865 (si:dkey-3h3.3)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120461865 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_10
zf-RING_5
zf-RING_6
zf-rbx1
KH_DTX3L
zf-C3HC4_4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
120461865
NCBI-ProteinID:
XP_039506125
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MASPPKIFTEVRLKIDQVIPPESVPSILLGKTVKLRREGGYTVAIGSFQDIEDIHRKCIT
TRPSYDGSSNLRREEMRQRGHTAAGLEQAQSYSLEVQPVQVDEIIMHYIKEKKSNELHII
ENRNGVSINQNKSHVTFTSKTGKNIQAQFAREQFITLYQKTATGLQTRTYIYSRNINALC
SAEFPDLLIKTDQKHLELTGSFIMLERFDTFLNGSTQDRMGRIYPQHQTPRKTKDDDVHY
KQPVKQEKSTDPAKDEKCPICLDLIKTPDCTVLSKCKHKFCKDCLATAFQLKPACPICGE
IYGDLTGTQPKVGTMTVSRDSSSLPGYRQYGTIVINYHIPSGRQGNEHPNPGMDYQGASR
IAYLPDSTEGNNVLKLLRRAFDQRLIFTIGYSSTTGKNNVVTWNDIHHKTSRDGGPTHYG
YPDPDYLKRVQDELKAKGIY
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcccgccaaagatatttactgaagtgagactgaagattgatcaagtcataccg
ccagagtcagttccaagcattcttctcggcaagacagtgaaacttagacgcgagggtgga
tatacagttgccatcgggtcattccaagatattgaagatatccatagaaagtgtataact
acacgaccttcatatgatggaagtagtaatctaaggcgagaagaaatgcgtcaaaggggc
cacactgcagcaggtttggaacaagctcaaagttactctttagaagttcaaccagttcag
gttgatgaaattataatgcattacataaaagaaaagaaatctaatgaacttcacataata
gaaaataggaatggggtttccataaatcagaacaaaagtcatgtgacttttacttccaag
actggtaagaacatacaagctcaatttgcacgagaacagtttataacattatatcaaaag
actgcaacagggctgcaaactcggacatacatttacagtcgaaatattaatgcactttgc
agtgcagagtttccagatctcttaatcaaaacagatcaaaagcatctggaactgaccggc
agcttcattatgcttgaaagatttgacacatttttgaatgggagcacacaggacagaatg
ggaagaatatatccacagcaccaaaccccaagaaaaacaaaagacgatgacgtacattac
aagcaacctgtgaaacaagagaaatcaacggacccagccaaagatgagaaatgtccaatt
tgtttggatttaatcaagacacctgattgcacagttttaagtaaatgcaagcacaaattt
tgtaaagactgtttggctacggctttccagttgaaaccagcctgtccgatatgtggagag
atatacggcgatcttacagggacgcaaccaaaagtaggaaccatgactgtctcaagggac
agctcttctttacctggatacagacaatatggaacaatcgtaattaactaccatatacca
agtggacgtcaggggaatgaacacccaaacccaggcatggactaccagggggcgtcccgc
atagcttacctccctgactcaacagaggggaacaacgtactgaagcttctgcggagggcg
tttgaccagcgactcattttcaccattggatattcatctaccactggaaagaacaatgtc
gtgacctggaatgacattcaccataagacgtctcgagatggagggccaacacattatggt
tacccagatccagactacctgaaacgagtacaagatgaactgaaagcaaaaggaatttac
tga
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