Pimephales promelas (fathead minnow): 120461928
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Entry
120461928 CDS
T08155
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120461928
04020 Calcium signaling pathway
120461928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120461928
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120461928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
120461928
NCBI-ProteinID:
XP_039506196
LinkDB
All DBs
Position
Unknown
AA seq
1867 aa
AA seq
DB search
MEGWTAVLYNTNDALGSTWNWVYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAF
MKLRRQQQVERELNGYRAWIDRAEEVMLAEENKNSGRSALDVLKRATSKKNARRRGPGEE
KYSEISTVGGPRPRVGIRTARRGPAAYMRRKERMLRISIRRMVKTDSFYWIVLSLVGLNT
ICVSIVHHNQPEWLTVIQYYAEFVFLGLFLAEMFLKMYGLGFRLYFHSSFNCFDCGVIVG
SIFEVVWGFFRPGVSFGISVLRALRLLRIFKITKYWTSLRNLVVSLMSSMKSIISLLFLL
FLFIVVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQG
GVQYGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKEEEEEEEEFFNQRYKSR
EFGLSERRRRPYLYRKRAIHRGRPSPAEAEEEPACKAAEEQPVNAFAGRRERRKKINMSV
WEQRTNQLRKRRKMASREVLFGSPTEDQLDTPVSDHHQQSCMSPEASPLHLPESPMSVGI
PLPEPPMSITIPLPEPPESEPLPLMGSGLEERPGVNNHHSNTERKHRVARKFRAAAMAGV
VEGGRHKRHRHREPRTESRNAENHQQFGCGEKQAEEGEGKMEETQSKTTETETSGMQIEN
QEECTREFVGDVTGLSQASGLQELQSVCTGMEDQAESQRHKEDFTSESKYISGEVSDMEN
NGSYLNQDACITETCIKRETSTQPLLEMAPMSVSFKDVEAGYSDKAGDDDDDDDDDENGG
EQSTVPKPDIPDSMFIFKSTNPIRRICHYVVTLRYFEMTILLVIVASSIALAAEDPVCAS
SERNKVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDLWNILDFIVVVGALIAFAL
TNLMGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVLNILIVYKLF
MFIFAVIAVQLFKGKFFYCTDGSMGTQKECQGYYIDYARDRKEVKKREWRRHEFHYDNVL
WALLTLFTVSTGEGWPQVLQHSVDVTEENHGPSRGNRMEMSIFYVVYFVVFPFFFVNIFV
ALIIITFQEQGDKMMEECNLEKNERACIDFTISAKPLTRYMPQNRQTLQYRLWHFVVSPS
FEYTVLVMIALNTVVLMMKYHSAPAAYDVVLKHLNTAFTVLFSLECILKIMAFGFINYFR
DTWNIFDFITVLGSITEIVVDLQSVNTINMSFLKLFRAARLIKLLRQGYTIRILLWTFVQ
SFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLTDESHINQHNNFKTFFGALMLLFRSATG
ESWQEIMLSCLEGKECEPDPSIVPPFTSPDHEGGCGTDFAYFYFVSFIFFSSFLMLNLFV
AVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAACGRIHYTAMYEMLTHMSPPLGLGK
KCPAKVAYKRLVLMNMPVDEDMTVHFTSTLMSLIRTALEIKIARGGEDRLQLDTELQKEI
SCTWPHLSQKTLDLLVPINKDTDMTVGKIYASMMIMDYFKQSKAKKLRLQIEAQRSSTLP
LIAHSAGSALTSGGFVALSPISPQELLLQPMTQRTDSSEDYDASQVDESGLNGVWGEDRP
PEHAFRTRHKSYKAAVSHSDQTQYMEKVRGRPKEQRFLLSPDNTNSKSRSRSPSEERIHG
VTRQGNSSESPVPSTSESSTPSGKRRLSQISTCSRPHISYSPLVLHTQPSSQADDDDDDD
PTVQQMLGCCSTALWDDGAEDQEGRVRQQESPRFDYLSSSARRYPSESFLNLQDEEHSPD
SATHMETLTFEAAVATSLGRANTVSASMRTRSRVGWQVPNGHFRKRLAQSVSLAGGEALS
DADDDKY
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atggagggatggactgcagtcctctacaatactaatgatgctttaggatccacatggaat
tgggtatatttcattcctctcatcattatcggctcgttttttgtgctcaaccttgttttg
ggtgtcctttctggggaatttgctaaagagagagagagggtggagaacagacgtgccttc
atgaagcttagacgacagcaacaggtggagagagaactcaacggctaccgggcctggatc
gacagagcagaggaagtaatgctcgcagaagaaaacaagaattctgggaggtcagcatta
gatgttttgaaacgggccactagcaagaaaaatgcgaggcgtcgaggaccaggggaggag
aaatattctgaaatctctacagttggtgggccgcgaccaagagttggtatacgaacagca
agacgaggtcctgctgcttacatgcggcgcaaggaacgcatgttgcgaatctctattcgt
cgcatggttaaaaccgacagcttctattggatagtcctcagtctggtgggtctcaacacc
atctgtgtttccatcgttcatcacaatcaaccggaatggctcactgtcattcaatactac
gcagaattcgtgtttcttggactttttcttgccgagatgtttctgaaaatgtatggcctt
ggtttccgtctgtacttccattcatcctttaactgctttgattgtggggttattgtagga
agtatttttgaagtggtttggggattcttcaggccaggagtgtcttttggcatcagtgtc
ctcagagccttacgtctgctacgaatctttaagataacaaagtactggacttccttgcgg
aacttggtggtgtccctcatgagctccatgaagtcaatcatcagtttgctcttcctcctc
tttctgtttatcgtagtctttgctttgcttggcatgcagctgtttggtggcaggttcatt
tttgaagattacactccaactaattttgacacgtttccagccgccatcatgaccgtcttt
cagattcttactggagaagactggaatgaggtgatgtacaatgggatacgctcccaagga
ggagtgcagtatggaatgtggtcttccatctactttattgttttaaccttgtttgggaac
tacacattgctcaatgtattcttggctattgccgtggataatctagccaacgcacaggaa
ctaactaaggaagaagaggaggaggaagaagagttcttcaatcagcgttataaaagcaga
gaatttggcctctcagaaaggagacggaggccgtacttgtacaggaagcgggccatccac
cgaggacgaccatctccagcagaggcagaggaggaacctgcttgcaaggcagcggaagag
cagcccgtgaacgcttttgctggccgccgtgagagacgcaaaaagattaacatgtccgtc
tgggagcaaaggacaaaccagctgcggaaacggcgcaagatggccagtcgtgaggtactg
tttggcagtcccactgaggatcagttggacactccagtgagtgatcatcaccaacagagc
tgcatgtcccccgaggcaagccccttacacttgccagaatcaccaatgtctgtggggatt
cccctgccagagccacccatgtctatcactattcctctccccgaacctccagagtctgag
ccgttgcccctgatgggatcggggctggaggagaggccgggcgttaataaccaccattca
aacacagaaaggaagcatcgtgtggcaagaaagtttcgggctgctgccatggcgggggta
gtggagggtgggcgacacaaacggcacagacatcgtgagcccagaacagagagccgaaat
gcggagaatcaccagcaatttgggtgcggtgagaaacaggcggaagagggtgagggtaaa
atggaggaaacacagtctaaaaccactgaaactgaaacgtctggcatgcaaattgagaac
caggaggaatgcacaagggagtttgtgggagacgtgactggactttcccaagcgtctggc
cttcaggagcttcagtctgtctgtactggaatggaggatcaagctgaaagccagaggcac
aaagaagactttacatcagaatcgaaatatatctcgggggaagtctcagacatggagaac
aacggcagctatcttaaccaggatgcgtgtataacagaaacctgcattaaacgagagacg
tcaacccagcctttgttggaaatggcaccaatgagtgtaagtttcaaggatgtggaagcc
ggttactcagataaagctggcgatgatgacgatgacgatgatgatgatgagaatggaggt
gaacagtcaactgtacccaaacctgacataccagacagcatgttcatattcaagagcaca
aatcccataagaaggatctgccactatgtggtgaccctgcggtactttgagatgaccatt
ctcctggtgattgtggccagcagtattgcactagcagctgaggaccctgtgtgcgccagt
tcagagaggaataaagttctccgttactttgattatgttttcactggcgttttcacattt
gagatgattataaagatgattgaccagggcctcattcttcatgatggatcatatttccgg
gacttgtggaacattctagactttattgtggtggttggagctctaattgcctttgcattg
acgaatttaatgggaaacaacaaaggcagagacataaagaccattaagtccttgagggtt
ctccgagttctccgccctctcaagaccatcaaaagacttccaaagctcaaggctgtgttc
gattgcgtggtcacatccctgaagaacgtcctcaacattctcatcgtgtacaagctcttc
atgttcatctttgctgtcattgcagtgcagctctttaagggaaagttcttctactgtact
gatggttcaatgggcacccagaaagaatgccagggctactacattgactatgcgagggac
cgcaaggaggtgaagaagagggagtggaggagacacgagttccactatgataatgtcctc
tgggctctacttacactcttcactgtgtctacgggagagggctggccacaagttcttcaa
cactcggtggatgtcactgaagaaaaccacggcccaagcagaggaaaccgaatggagatg
tccattttctatgtcgtatactttgtggtttttccgttcttttttgtcaacatctttgtt
gccctcatcataatcacattccaggagcagggtgacaaaatgatggaggagtgcaacttg
gagaaaaatgagcgggcatgcattgactttactatcagcgcaaaacccctaacaagatat
atgcctcagaacaggcagaccctccagtaccgattgtggcactttgtggtgtcaccatca
ttcgagtacacggttctagtcatgattgcactcaacacagtagtgctcatgatgaagtac
cactctgcgccagctgcctacgacgttgtcctgaagcacctcaacacagcgttcactgtg
ctcttctctctggaatgcatcttaaagatcatggcctttggattcataaactatttccgt
gatacatggaacatctttgattttatcacagtgctggggagtataactgaaattgtggta
gatttacagtctgtgaacaccatcaatatgagttttctaaagctcttccgggcagctaga
ctcattaaactgttgagacaaggctacacaatacggattctgctgtggacgtttgttcag
tccttcaaggctcttccatatgtttgcctcctcattgccatgcttttcttcatttacgcc
attattggcatgcaggtgtttgggaatattaaattgactgatgaaagccacattaatcaa
cacaacaatttcaagacattctttggtgccttgatgctgctctttagaagtgccactgga
gagtcttggcaagagatcatgctctcatgtcttgaagggaaggagtgtgaaccagaccct
tcaatagtaccacctttcacttctccagaccatgaagggggctgtggcactgactttgcc
tatttctattttgtctccttcatctttttcagctcatttttgatgctgaatctgtttgtg
gctgtgattatggacaactttgagtatttgacacgagactcgtccattcttggacctcac
cacctggacgagtttgtgcgcatctggggggaatatgaccgagcagcatgtggccgtatt
cactacactgccatgtatgagatgctaacccacatgtctccacctcttggattgggaaag
aagtgtcctgccaaagttgcctacaagagactggtgctgatgaatatgccagttgatgag
gacatgacggttcacttcacatccacactgatgtctctgatccgcactgcactggagatc
aaaattgctagagggggcgaggaccggctacagttggacacggaattgcagaaggagata
agttgcacctggccacacctgtcccaaaagactctggacctgctggtacccatcaacaaa
gacacagacatgaccgttggaaagatctatgcatctatgatgatcatggattactttaag
cagagcaaagctaagaagctgaggctgcagatagaggcccagagaagttccaccctgccc
ctgatagctcacagcgcaggatcagccctgaccagtggagggtttgtggctttgagccca
atttcaccacaggagctgttattgcaacccatgacccagcgcacagacagcagtgaagac
tacgatgcctctcaggttgatgaatcagggttgaatggcgtgtggggggaagatcgccca
cctgaacatgcattcagaaccagacacaagagctacaaagctgcagtgtcccactcagac
cagacacagtacatggaaaaggtgcggggacgaccaaaagaacaacggttcttactgtcc
cctgataacaccaactcaaaatcccgctcccgctctccaagtgaggagcgcatacatggg
gtcaccagacagggaaacagctcagaaagccccgtcccctccacctcagagtccagcacg
ccgagcggcaagcgtcgcctgtcccagatctccacctgctcacgccctcacatctcctac
tcacccttagtgttacacacgcaaccttcatcacaagctgatgatgatgacgacgatgac
ccaaccgtccagcagatgttagggtgctgtagcactgctttatgggatgacggcgctgaa
gaccaggaaggtagagtgagacaacaggaaagcccccgttttgattatttgagttcatcc
gcccggcgctatccttctgaatccttccttaacctacaagatgaagagcacagcccggat
tctgccacccatatggaaactctcacctttgaggcagcggtggccaccagcctaggccgc
gcgaacacggtcagcgcctcgatgcgcacgaggtcacgggtaggctggcaggtgcccaac
ggacacttccggaagagattggcacagagcgtatctctcgctggcggcgaagctctcagc
gatgcagacgacgacaaatactag
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