Pimephales promelas (fathead minnow): 120461936
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Entry
120461936 CDS
T08155
Symbol
brcc3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03440
Homologous recombination
pprm04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120461936 (brcc3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120461936 (brcc3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120461936 (brcc3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120461936 (brcc3)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120461936 (brcc3)
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120461936 (brcc3)
Peptidases and inhibitors [BR:
pprm01002
]
Metallo peptidases
Family M67
120461936 (brcc3)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
120461936 (brcc3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
120461936 (brcc3)
BRISC complex
120461936 (brcc3)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
120461936 (brcc3)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
120461936 (brcc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
REP_ORF2-G2P
DUF7385
Motif
Other DBs
NCBI-GeneID:
120461936
NCBI-ProteinID:
XP_039506209
LinkDB
All DBs
Position
Unknown
AA seq
260 aa
AA seq
DB search
MAVNAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIGKVCLESAVEL
PRILCQEEQDTYRRIHSLTHLDPITKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNK
QSIIKLQKEKEQLTRELAAL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaacgcggtacatttagagtcagatgcatttctagtatgtatgaatcatgct
ctgagtacggagaaggaggaagtaatggggctctgcattggcgaggtggacacaaaccgc
attgtgcacattcattctgtcatcattctgcgtcgatcggacaagaggaaagacagagtg
gagatttccccagagcagctttcagcagcatccactgaagcggagaggttggctgagatg
acaggacgtcccatgagggttgtgggctggtaccactctcatccacacatcactgtgtgg
ccatcacatgttgatgttaggactcaagcaatgtatcagatgatggatcagggttttgtt
ggactcatcttctcatgctttatagaagataaaaacacaaagaccggtagagttctgtac
acctgtttccaatcagtacaggcccagaaaggctcagagtatgagcggattgagatccca
atccatgtagtcccacatgaagccattggaaaagtatgtctggagtctgccgtggaactg
cccagaatcctctgtcaagaagaacaggatacgtacagaaggattcacagtttaactcat
ctggatccaatcacaaagatacataatggatcagtgttcactaaaaacctgtgcagtcag
atgtcggccataagcggcccgctgctgcagtggctggaagatcgactggaacagaataaa
cagagcatcatcaaactccagaaagagaaggagcaactgacacgagaactggctgcatta
taa
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integrated database retrieval system
