Pimephales promelas (fathead minnow): 120462121
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Entry
120462121 CDS
T08155
Symbol
gdf6a
Name
(RefSeq) LOW QUALITY PROTEIN: growth/differentiation factor 6-A
KO
K20012
growth differentiation factor 6
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04060
Cytokine-cytokine receptor interaction
pprm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120462121 (gdf6a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120462121 (gdf6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pprm04052
]
120462121 (gdf6a)
Cytokines and neuropeptides [BR:
pprm04052
]
Cytokines
Transforming growth factors (RSTK binding)
120462121 (gdf6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Herpes_IE2_3
Motif
Other DBs
NCBI-GeneID:
120462121
NCBI-ProteinID:
XP_039506527
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All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MDALRAVAFYTLFIFLWSLPCCQSAALLTQKRSKGARSAYDGQRSPKFLKEIFASSPGVS
RRDDFKDPVVPHDYMISIYRTYSAAEKLGLNASFFRSSKSANTITSFVDRGKDDLTLSPL
RRQTYLFDVSTLSDKEELVGAELRIFRKAPGDVQASPSGVYNIHLLSCRSERPLASRSLD
LQDSRNTEWEVLDVWGIFKNRHQGNQLCLQLKVTHGKTDTEIDLKQLGLHRHGRTQQEKA
ILVVYTRSRKRENLFNEMKEKIKSRGDHREEEESALQFKARRRRRTALNNRHGKRHGKKS
KSRCSKKALHVNFKELGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSM
DPNSTPPSCCVPTKLSPISILYIDSGNNVVYKQYEDMVVEQCGCR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggatgccttgagagcagtcgccttttacacactcttcattttcctttggagtttaccg
tgttgccagtcagctgcgcttctaacgcagaaaaggagcaagggtgccaggagcgcgtat
gatggacaaaggtcacccaaatttcttaaagagattttcgcatcctccccgggcgtgagt
cgtcgggatgactttaaggacccggttgtgccccacgattacatgatctccatatacagg
acttactccgctgctgaaaaactggggctcaatgcaagctttttccgctcttcaaagtct
gcaaataccataacgagttttgtagacaggggaaaagacgatctcacgctctctcctttg
cgaagacaaacttatctgtttgatgtctcaactctctcagacaaagaggagctggtcggt
gctgaattaaggatatttcgcaaagcgcccggggatgtccaagcgtccccatcaggcgtc
tacaacattcatttactctcatgtcgatcagagaggccactggcttccagatcccttgat
cttcaggattcccgaaacacagaatgggaggttctggatgtgtgggggatttttaaaaac
aggcatcaagggaatcagctttgtctccagctcaaggttacgcatggcaaaaccgacact
gagatcgacctaaagcaactgggtttgcaccggcacggccgaacgcagcaagaaaaagcc
attttggtggtctacacgcggtctaggaagagagaaaatttgtttaatgagatgaaagag
aagatcaagtctcgcggagaccatagggaggaggaggagagcgcgctgcagtttaaagcg
cggcgcagacggagaactgcgctcaataatcgccacgggaaaaggcatggcaaaaagtcc
aaatcgagatgcagcaaaaaggcactgcatgttaacttcaaagagctgggatgggacgac
tggatcatcgctcccctggattacgaagcctaccactgcgagggggtgtgcgacttccca
ttgaggtcgcacctggagccgaccaaccacgccatcattcaaacgctcatgaactccatg
gaccccaacagcacgccaccgagctgttgcgtacccacaaaactcagtcccatcagtata
ctatacatagactccggcaacaacgtcgtgtacaaacagtacgaggacatggtggtcgaa
cagtgtggctgtaggtag
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