Pimephales promelas (fathead minnow): 120462170
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Entry
120462170 CDS
T08155
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120462170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120462170
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120462170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
EVH1_PP4R3
Motif
Other DBs
NCBI-GeneID:
120462170
NCBI-ProteinID:
XP_039506615
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MAKRIAEKELTDRNWDQEDEGEEAGMFSVATEDVMKNRSIKKAKRRTAGAEGESGGAFKA
FKGFSLTSATGTGSFSGFGNGAGFKPMSSLTNGSVASVAPSFASFNVPTFAKTNSGPLTF
NSSVPSKPTDDVTSNGSAPSTKEYNRQLTALNCSVRDWITKHVNDNPLCDLNPIFRDYER
HLASIERKYGSGTSDGGAEKRLVSSGAGSAVSGAAPQLFSFKDKDDDKPAAAAAPGVSFN
FGQKVDSSVLGALASSGAPSFSFSTTTSSSPGVSVFGSAVSIVSPAVTASKTQTADENGE
ESEEPPVPVVKEIKEKDAFYSKKCKLFYKKDGEFKEKGVGTLHLKMVAESKLQLLVRADT
NLGNILLNIMVPSSMPCSRTGKNNVMVVCVPNPPVDDKNPSTPVPLLVRVKTAEDADELH
GILQEKKA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaggattgcagagaaagagttgacggacaggaactgggaccaggaggatgaa
ggagaggaggcaggaatgttttcagttgcaaccgaagatgtgatgaagaatcgctccatc
aagaaagccaagcgtcgtaccgccggagcagagggagagagtggaggggctttcaaagct
tttaaggggttctctctgacatcggccacagggacagggtcattctctggctttggtaat
ggcgctggtttcaaacctatgtccagcctgaccaatggtagcgtggcttcagtggctcct
tcttttgccagttttaacgttcccacgtttgctaaaactaacagtggtcctttaaccttc
aacagctccgtcccctccaagcccacggatgatgtcacctccaacggctccgcccccagc
actaaagagtacaaccggcagctcaccgcgctcaactgctccgtgcgcgactggatcacc
aaacacgtcaacgacaaccccctgtgtgacctgaaccccatcttccgggactacgagcga
cacctggccagcatcgagaggaaatacggcagcggcacgtcagacggaggggcggagaag
cggcttgtgtcgagcggagcgggttctgctgttagcggagcagcaccgcagctcttctcc
tttaaagacaaggatgatgacaaaccggcagctgcggcggctccgggcgtctcttttaat
ttcggccagaaggtggacagctccgtgctcggtgcgctggcgtccagtggagcgccttct
ttctccttctccaccaccacctcctcatccccaggtgtttcggtgtttggatctgcggtc
agcattgtcagtcctgcggtgactgccagcaaaacccagactgcagatgaaaatggggaa
gaatcagaggagccgcctgttcctgtggtgaaagagatcaaggagaaagacgccttctac
tccaaaaagtgtaagctgttttataagaaggacggagagtttaaggagaagggggtcggg
acgctgcatctgaagatggtggctgagagcaaacttcagctgttagtgcgcgccgacaca
aacctggggaacatcttgctgaacatcatggtgccctcctccatgccctgctcacgaact
ggcaaaaacaacgtgatggtggtgtgtgtgccaaaccctcccgtggacgacaagaacccc
agcacacccgtcccgctgctcgtgcgcgtcaaaacggccgaggacgcagacgaactgcac
gggatcctgcaggaaaagaaagcctaa
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