Pimephales promelas (fathead minnow): 120462171
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Entry
120462171 CDS
T08155
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120462171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120462171
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120462171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
120462171
NCBI-ProteinID:
XP_039506616
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MAKRIAEKELTDRNWDQEDEGEEAGMFSVATEDVMKNRSIKKAKRRTAGAEGESGGAFKA
FKGFSLTSATGTGSFSGFGNGAGFKPMSSLTNGSVASVAPSFASFNVPTFAKTNSGPLTF
NSSVPSKPTDDVTSNGSAPSTKEYNRQLTALNCSVRDWITKHVNDNPLCDLNPIFRDYER
HLASIERKYGSGTSDGGVEKRLVSSGAGSAVSGAAPQLFSFKDKDDDKPAAAAAPGVSFN
FGQKVDSSVLGALASSGAPSFSFSTTTSSSPGVSVFGSAVSIVSPAVTANKTQTADENGE
ESEEPPVPVVKEIKEKDAFYSKKCKLFYKKDGEFKEKGVGTLHLKMVAESKLQLLVRADT
NLGNILLNIMVPSSMPCSRTGKNNVMVVCVPNPPVDDKNPSTPVPLLVRVKTAEDADELH
GILQEKKA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaggattgcagagaaagagttgacggacaggaactgggaccaggaggatgaa
ggagaggaggcaggaatgttttcagttgcaaccgaagatgtgatgaagaatcgctccatc
aagaaagccaagcgtcgtaccgccggagcagagggagagagtggaggggctttcaaagct
tttaaggggttctctctgacatcggccacagggacggggtcattctctggctttggtaat
ggcgctggtttcaaacctatgtccagcctgaccaatggcagcgtggcttcagtggctcct
tcttttgccagttttaacgttcccacgtttgctaaaactaacagtggtcctttaaccttc
aacagctccgtcccctccaagcccacggatgatgtcacctccaacggctccgcccccagc
actaaagagtacaaccggcagctcaccgcgctcaactgctccgtgcgcgactggatcacc
aaacacgtcaacgacaaccccctgtgtgacctgaaccccatcttccgggactacgagcga
cacctggccagcatcgagaggaaatacggcagcggcacgtcagacggaggggtggagaag
cggcttgtgtcgagcggagcgggttctgctgttagcggagcagcaccgcagctcttctcc
tttaaagacaaggatgatgacaaaccggcagctgcggcggctccgggcgtctcttttaat
ttcggccagaaggtggacagctccgtgctcggtgcgctggcgtccagtggagcgccttct
ttctccttctccaccaccacctcctcatccccaggtgtttcggtgtttggatctgcggtc
agcattgtcagtcctgcggtgactgccaacaaaacccagactgcagatgaaaatggggaa
gaatcagaggagccgcctgttcctgtggtgaaagagatcaaggagaaagacgccttctac
tccaaaaagtgtaagctgttttataagaaggacggagagtttaaggagaagggggtcggg
acgctgcatctgaagatggtggctgagagcaaacttcagctgttagtgcgcgccgacaca
aacctggggaacatcttgctgaacatcatggtgccctcctccatgccctgctcacgaact
ggcaaaaacaacgtgatggtggtgtgtgtgccaaaccctcccgtggacgacaagaacccc
agcacacccgtcccgctgctcgtgcgcgtgaaaacggccgaggacgctgacgaactgcac
gggatcctgcaggaaaagaaagcctaa
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