Pimephales promelas (fathead minnow): 120462281
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Entry
120462281 CDS
T08155
Symbol
usp43b
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43 isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120462281 (usp43b)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120462281 (usp43b)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120462281 (usp43b)
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120462281 (usp43b)
Ubiquitin system [BR:
pprm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120462281 (usp43b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
120462281
NCBI-ProteinID:
XP_039506794
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
MDKRVKNAKKDAGKSTKRTGKLFRRKSFKSVESLVSKILKSLGSLASGGETTERSDAEDD
DGGFGESAPCAGNSGHVKIEDSGSQVRKSSSLPCRSSAKERLFSLYGDKTPGALGLKNHG
NTCFMNAVVQCLSNTDMLSEYLGLERYKLDMCHRGMNGFIMDENGQHGIGEVTERLASLV
RALWTFQYTPQLSAEFKMTVSKYGAQFRGNSQHDALEFLLWLLDRLHEDVNSSSTLPNGN
NRSKSTGKIKLVGFTNGSSKTPYGQPAVTFTIIMTWQGTKTRCQNILTALVLKSWDRLSI
SKGPEGDDEKPTSDTLITPQAQPDVRHSFVQEHFQAQYKSSLTCPHCLKQSNTFDPFLCI
SLPIPLRQTRPVCVTLVFSNKGQRYLRVGLAVPLFGSLACLRRMVADEGKISPDQVILTE
IYTTGFKRSFFDDDDLTSIAESDVIYAFQAPPLYIRGGSARISGFHHSLPSSLYTSSGPA
GHRLAASGALSSEFLNQADGMVKILLLVCNAAGAGQQAVRFGPPFLMREDRSVSWDQLQQ
SILSKLYYLMINGSHAHNFRVLFKIRVVGGSASYSYLNPQDGRPLNHPAVDRALKLCGSG
GPPHVKLIVEWEHRMKDCLFGNIQEEVVKDSESVRAQQQHHVQQHSCTLDECFELYTKEE
QLAPDDAWKCPHCKQLQQGTVQMSLWTLPDLLILHLKRFRQVGERRNKLSTLVHFPLMGL
AMGRHVVKRSNSVRPPHGWKQQAHHKPETSRHSLDFLYDLYAVCNHHGGMHGGHYTAYCR
NSVDAQWYAYDDSTVEPVPEGEVCTRGAYILFYQRRDVIPSWSANCSLQGSSSVSISDHW
LIRLNADNRISNSTSKLSNSSSAPEPQTPHVPVIHEPLNEDDGVVEPTPFVRSFRGHSMS
MRYHSKSKPGSSKVLPLRWSFASKERRKPSGVAPQLANDELVEYLESGRRPRCTKEPIVS
IVASPSQVKAQLREDDSLSSPSCSSSLNGVERSSHRGLDSPRLPEGQSRPASDLNGIGCD
GSWAKSSSTATRQEHVRTQGSNSLQGSPTALPNGTSNSASHSRDSTLKRLRNQASAAASR
IHTSQMLTATGESRSKDGVLPATNKEVGNGKTLSSKSSIKLSLSNGTLNGKGIESRKSGT
SHKSANKMVSSRENQVRSSTANIKRAHSSSSIQSRLDMTLKRTSSLQRNSMLVPTPHKGL
AVDKSSYATLQRIRYSSTSLGRQRPVPESCF
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggataaacgcgtcaagaacgcgaaaaaagatgcggggaagtctactaaacgcacaggg
aaactgttccggagaaaatcgtttaaatctgtggaaagtttggtgagtaagatcttaaaa
agtttgggaagcttggctagcggtggggaaacaaccgaacggtccgatgcagaggatgat
gatggtgggtttggagaaagcgcaccttgcgctggaaactcgggacatgtgaaaatagag
gacagcggcagccaagtgaggaaaagttcctctcttccctgccgttcctccgcgaaagaa
cgactgttttcactgtacggggacaaaacgccaggcgcgttgggtctgaagaaccacggg
aacacctgcttcatgaacgccgtcgtgcagtgcttgagcaatacggacatgctctcagaa
tatctgggtttggagcgatataaactggatatgtgtcacaggggaatgaacggatttatc
atggatgagaacggtcagcacgggataggagaagttacggaacggcttgcgtctttggtc
cgagcgctttggacttttcaatacacacctcaactctcggctgagtttaagatgaccgta
tctaaatatggtgctcaattccgggggaattcacagcatgacgctttggaattcctgctc
tggcttctggaccgcctccatgaggacgtcaactcgtcttcaaccctacccaatggaaat
aacagaagcaaatcaactggcaagatcaagttagtaggatttaccaatggctcttctaaa
accccatatggccaaccagctgttaccttcaccattatcatgacttggcaaggtacaaaa
accaggtgccagaatatattgactgcactggttcttaaaagctgggacagactttccatt
tccaagggtccagaaggagatgatgaaaagcccacctctgataccctgatcacaccacag
gcgcagcctgatgtacgtcacagctttgtacaggagcacttccaagcacaatacaagtca
tctctgacatgcccacattgtctaaagcagagcaacacgtttgatccttttctgtgcatt
tctcttcccattcctctaagacagacgagaccagtgtgtgtgactttggtgttcagcaat
aaagggcagcggtatctgagagtggggctcgctgtgcctctcttcggctctttggcatgc
ctgcgcaggatggtggcggatgagggcaagatctctcctgatcaggtaatattgacagag
atctacacaacaggattcaagcgctcgttctttgatgacgatgacttgaccagcatcgca
gagagtgacgtcatctatgccttccaagccccgcccctttacatcaggggtggatctgca
cgaatctcagggttccaccacagtcttccgtcctctctgtacacctcgtctgggccggcg
ggtcaccgactggctgcgtccggagcgctgtcctctgagttcctgaaccaggccgatggg
atggtgaagatcttgctgttggtgtgtaatgcagccggagcaggacagcaggcagtgaga
tttggccctccgtttctgatgagagaggacagatcagtgtcgtgggaccagctacagcag
agcatcctcagtaaactctactatctaatgatcaacggatcacacgcacataattttagg
gtgttgttcaagattcgtgttgttggaggatcagcatcttatagctacttgaatcctcaa
gacggacggcctcttaatcaccctgcagtggacagagctctgaagctgtgcggctcaggt
ggacctccacatgtgaagctcattgttgagtgggagcacagaatgaaagactgtctgttt
ggtaatatccaggaggaggtggtgaaggactcagaaagcgtccgtgctcaacaacaacac
cacgttcagcagcacagctgtaccctggatgagtgctttgagctgtacaccaaagaagaa
caactggcccctgacgatgcatggaagtgccctcactgtaaacagctgcagcagggcaca
gtgcagatgagcttgtggaccctcccagacctcctcatccttcacctcaaacgcttccga
caggtgggagagcggcgtaacaagctctctacgctggtccacttccccctcatgggcctt
gctatgggccgccatgtggtcaagaggagcaattctgtccgtccaccacatggctggaaa
caacaggcccatcacaagcctgaaaccagccgacactcactcgacttcctatacgacctg
tacgctgtgtgtaaccatcatggaggcatgcatggaggccactacacagcatactgcagg
aactcagtggacgctcagtggtacgcctatgatgacagcactgttgagccggtgcctgag
ggagaagtgtgcactcgtggtgcttatatcctgttctatcagagacgtgatgtcattcca
tcctggtcagcgaactgctcactacaaggttcctccagcgtctctatatcagatcactgg
ctcatccgattgaatgcagacaaccgaatttccaattcaactagtaagctgtccaattca
tcttcagctcctgagccccaaacaccgcacgttcctgtcatccatgagcctctaaatgaa
gatgatggtgtagttgagccgacgccatttgtacggagcttccggggtcacagcatgagt
atgcgctaccactcaaaatccaagccaggctcaagcaaagttcttccactacgctggtca
tttgcttctaaggaacgcagaaagccctccggcgtagctccacaattggcaaacgacgag
ctggtggagtaccttgagtctggccggcggcctcgatgtaccaaggagcccatagtcagc
atcgtggctagtccttcacaggtcaaagcccagcttcgcgaggacgattccctgagttcc
cccagctgtagcagtagtctcaacggtgtggagcgaagtagccatcgaggtctggattca
cccaggctacccgaaggccagagcagaccagcatcagaccttaatggtatcggttgcgat
ggttcatgggccaaaagcagctcaacagcaaccaggcaggagcacgtaaggactcaagga
agcaactcacttcaaggttcccctactgcactccccaatggcactagcaacagtgcatct
cattccagagactctacgttaaaacggctccggaaccaggcgtctgcagcagctagcagg
attcataccagccaaatgctgacggccactggggaaagcaggagcaaagatggcgtcctt
cccgccaccaacaaggaggtgggtaacggaaaaacgctttccagtaagagctcgatcaaa
ctctctctatccaacggcactctgaatgggaagggaatcgagtcaaggaaatccggaact
tctcacaagagtgccaataaaatggttagtagcagagaaaaccaggttcgttcaagcaca
gctaatataaaacgcgcccacagctcatccagcattcagagcagactagatatgactttg
aaaaggacgtcgtccctccaaagaaatagtatgttggtgccgaccccccataaaggactt
gcggttgataaatcctcctatgcaacactacaaagaatcagatacagcagcacttcactt
ggcagacagagacctgtgcccgagtcctgcttctga
DBGET
integrated database retrieval system
