Pimephales promelas (fathead minnow): 120462381
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Entry
120462381 CDS
T08155
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-20-like
KO
K06087
claudin
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03272
Virion - Hepatitis viruses
pprm04382
Cornified envelope formation
pprm04514
Cell adhesion molecule (CAM) interaction
pprm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120462381
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120462381
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120462381
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120462381
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120462381
04147 Exosome [BR:
pprm04147
]
120462381
Cilium and associated proteins [BR:
pprm03037
]
Other cilia and associated proteins
Stereociliary proteins
120462381
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
120462381
Exosomal proteins of colorectal cancer cells
120462381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
tRNA_NucTran2_2
Motif
Other DBs
NCBI-GeneID:
120462381
NCBI-ProteinID:
XP_039506949
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MSHNLKHFCYCLSNTKFVSCARMSETILYLIYLTVWKTESDSSDQISHQCVHVLPPLLIT
QLSSLDMCVRHEQESTKITAGGGAEESLSTEKGLSKACVDVGRVQERGRMASTGTQIFAF
VLALLGILGATVATLLPNWKVSADVGSNIITAISQMQGLWMDCTWYSTGMFSCTLKYSVL
ALPAYLQTARTTMVLSCVLAAXGLCLASLGLKCTRWGGGRRAKRHAAMAAGSCFLASGFL
CLVPASWYTNEVIVSFLDANVPESNKFEPGGAVYVAFISSGFLFVGGSIFCLSCSGKRHG
PQDLILLPPDKLLMQQQQQLLQQQQQQEQLQHQYCSLSPLDNKTGYSLQDYV
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagtcataacctaaaacatttctgttattgccttagtaacacgaaatttgtgtcgtgc
gctcgtatgtctgaaacgatactttatttaatttacctgaccgtatggaaaactgaatca
gactccagtgatcaaatatcgcatcaatgcgtgcatgtactgccccccctgctaataact
cagctctccagtctagatatgtgcgtgaggcatgaacaggaaagcactaaaatcacagca
ggcggtggtgctgaggagtctctgtcgactgagaagggactgagcaaagcctgtgtggat
gttggccgggttcaggagcgcggcaggatggcgtccacaggcacgcagatcttcgccttc
gtgctggcattgctaggcatcctcggtgccacggtggccacgttactccccaactggaag
gtgagcgcggatgttggttcgaacatcatcacagccatttcgcagatgcagggtctgtgg
atggactgcacctggtacagcactggcatgttcagctgtacgcttaaatactcagtgctg
gcgctgcccgcgtacctgcagacggcacgcaccaccatggtgctttcatgcgtgttggca
gctnctgggttgtgtttggcctctctgggtttgaagtgcactcggtggggtggcggacgc
cgtgctaaacgccacgctgccatggcggccggctcatgctttctggcctcgggcttcctc
tgcctcgtccctgcctcctggtacacgaatgaggttatagtcagtttcctagacgccaat
gtgccggaaagcaacaagtttgagccgggcggtgccgtctacgtagccttcatctcgtct
ggtttccttttcgtggggggatccattttctgtctgtcctgctcgggtaagcgacatggc
ccacaggatttgatacttctccctccagacaaactcctcatgcagcagcaacagcaactt
ctgcaacaacagcagcaacaggagcagctccagcaccagtactgttctctctcaccgctg
gataacaagactggatacagcctgcaggactatgtgtaa
DBGET
integrated database retrieval system
