KEGG   Pimephales promelas (fathead minnow): 120462383
Entry
120462383         CDS       T08155                                 
Name
(RefSeq) claudin-20-like isoform X1
  KO
K06087  claudin
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03272  Virion - Hepatitis viruses
pprm04382  Cornified envelope formation
pprm04514  Cell adhesion molecules
pprm04530  Tight junction
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    120462383
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120462383
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    120462383
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    120462383
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pprm03037]
    120462383
   04147 Exosome [BR:pprm04147]
    120462383
   04515 Cell adhesion molecules [BR:pprm04515]
    120462383
Cilium and associated proteins [BR:pprm03037]
 Other cilia and associated proteins
  Stereociliary proteins
   120462383
Exosome [BR:pprm04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   120462383
  Exosomal proteins of colorectal cancer cells
   120462383
Cell adhesion molecules [BR:pprm04515]
 Immunoglobulin superfamily
  L1 family
   120462383
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like tRNA_NucTran2_2
Other DBs
NCBI-GeneID: 120462383
NCBI-ProteinID: XP_039506951
LinkDB
Position
Unknown
AA seq 286 aa
MCVRHEQESTKITAGGGAEESLSTEKGLSKACVDVGRVQERGRMASTGTQIFAFVLALLG
ILGATVATLLPNWKVSADVGSNIITAISQMQGLWMDCTWYSTGMFSCTLKYSVLALPAYL
QTARTTMVLSCVLAALGLCLASLGLKCTRWGGGRRAKRHAAMAAGSCFLASGFLCLVPAS
WYTNEVIVSFLDANVPESNKFEPGGAVYVAFISSGFLFVGGSIFCLSCSGKRHGPQDLIL
LPPDKLLMQQQQQLLQQQQQQEQLQHQYCSLSPLDNKTGYSLQDYV
NT seq 861 nt   +upstreamnt  +downstreamnt
atgtgcgtgaggcatgaacaggaaagcactaaaatcacagcaggcggtggtgctgaggag
tctctgtcgactgagaagggactgagcaaagcctgtgtggatgttggccgggttcaggag
cgcggcaggatggcgtccacaggcacgcagatcttcgccttcgtgctggcattgctaggc
atcctcggtgccacggtggccacgttactccccaactggaaggtgagcgcggatgttggt
tcgaacatcatcacagccatttcgcagatgcagggtctgtggatggactgcacctggtac
agcactggcatgttcagctgtacgcttaaatactcagtgctggcgctgcccgcgtacctg
cagacggcacgcaccaccatggtgctttcatgcgtgttggcagctctggggttgtgtttg
gcctctctgggtttgaagtgcactcggtggggtggcggacgccgtgctaaacgccacgcc
gccatggcggccggctcatgctttctggcctcgggcttcctctgcctcgtccctgcctcc
tggtacacgaatgaggttatagtcagtttcctagacgccaatgtgccggaaagcaacaag
tttgagccgggcggtgccgtctacgtagccttcatctcgtctggtttccttttcgtgggg
ggatccattttctgtctgtcctgctcgggtaagcgacatggcccacaggatttgatactt
ctccctccagacaaactcctcatgcagcagcaacagcaacttctgcaacaacagcagcaa
caggagcagctccagcaccagtactgttctctctcaccgctggataacaagactggatac
agcctgcaggactatgtgtaa

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