Pimephales promelas (fathead minnow): 120462457
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Entry
120462457 CDS
T08155
Name
(RefSeq) rho GTPase-activating protein SYDE1 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120462457
Membrane trafficking [BR:
pprm04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
120462457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
120462457
NCBI-ProteinID:
XP_039507037
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MAEPLLRRTFSKLRAKERFRRKTDPKLTEVTEKVELFQSPPSTGSTSGHAEPESPEREEC
TIRSQITVSKKQNWAKLPSTCRDPVGTDLVYGPLDWDLCSGKSEVSKQAWNQLTLSEDGL
KRNRSDLELEFSAPCNSVEASLPELTPSSTTFTDVCVSSSSAKISGQGAYLQHLDRSSRA
WVLSTGKPQASDEAQNPARITEWRQGPDGDGNIWYNPIPEEDDSRASGEADREKYGDPWR
KRDQKRSGGLTNQTRDFQTEVDLIRTDSSDLVTLQSDCIIPASVVNSESSAAPKRSPGEG
GNGSSVIDKIKSPGTVRRLSMKMRKLPELRRKLSLRSSRNQRHGQSQGNASSAPGASDEA
LPPNACKESSNIISKYHLDSSAPARPRRRSSRMRSASKGGYLSDGDSPELLPKGQGSKGS
PTPQDSLAVADAESFRLYSLTDQPRCAQRLSGLLTVHLLGVEELLRPPRIDATKEVFCAI
QVDGVTRARTSLLTCRGACLPLNHTFNLELERARLLKLVILTPTTASANIGSCALAAPAR
NRVCCLGAVAIPSLFKASRSQQLCVRLEPRGLLYVKLTLLEQFVTPFPRLSDLPPPTVFG
VELRPLVEKEASALGVPLIIQKCVSEIERRGLRVVGLYRLCGSAAVKKELRDAFEKDSAA
VSLNDELYPDVNVITGILKDYLRELPSPLITRTLYEVVLEAMMVRPACRHDSDAPRSQDT
VALLQCLPEAEKATLSFLLDHLSLVASYSDSNRMTCQNLAVCFGPVLLTPTQESWQAGLT
APGSGALMGSGAARGRSFAHSEEIASAVDFKRHIEALHYLLQLWPVPKDRVIDDSDQSQV
ISSPVSQSSSLWQSLPSVQDEPVVSRRGRGLQDEPVVSRRGRGLQDEPVVSRRGRGLQDE
PVVSHRGRGLQDEPVVSHRGRGLQDESVVSHRGRGLQDDPVVSRRGRGRLESPPCNRYAG
DWSVCGRDFMSNDEADYDEVAGSESDDDMDEAKKRDVWASPDGLFVDDFALDFDAPFTCR
LSLKDFDTLISDLERELAKQINICL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcagagccgctgctcagacggactttctccaaactccgggcgaaagagcgattccgc
cgcaagacggaccccaaactcaccgaagtgacagaaaaggtggaacttttccaaagtcct
ccatcaactggatccacctcgggtcacgctgagcccgagagcccggagcgagaggagtgt
accatacgctcacagatcaccgtctccaaaaaacagaactgggccaaacttccctccact
tgcagagacccagttggcacagatctggtctacgggccactggactgggatttgtgctct
ggaaagtctgaggtctcaaaacaggcctggaaccaactaactttaagtgaggatggcttg
aagagaaatcggagtgatcttgaattggagtttagcgcaccgtgcaactcagttgaggcc
agtttaccggagctgaccccttcctctacgacctttacggatgtgtgtgtctcttccagc
tcagctaagatctctgggcaaggcgcttaccttcagcacctggacaggagcagtcgagcc
tgggtactgtccacgggaaagccccaggcatcagatgaggcccagaatccagccagaatc
acagagtggcgacagggcccggatggagacggaaacatttggtacaaccccattcctgaa
gaggacgactcgagggccagcggagaagcagatcgggaaaaatacggagacccgtggaga
aagagagaccagaaacgatcagggggtttgaccaatcaaacgagagactttcaaactgaa
gtcgacttaatcaggacggatagttcggatctggttacgctacagtcggactgtattatc
cctgcaagtgttgtgaactctgagagttcggcggcaccaaagagaagcccaggagagggt
ggaaatggcagcagtgtgatcgacaagatcaagtctccaggaacggttcggcggctctct
atgaagatgcggaaactcccagaactaaggcggaagcttagcctgcgctcgtcgcgtaat
cagcgtcacggacagagccaaggaaatgccagcagtgcaccgggagcctcagatgaggct
ttaccgccaaatgcatgcaaagaatcatccaacatcatcagcaagtaccacctggactcc
agtgcacccgcacggccaagacgtcgatcctctcgaatgagatccgctagtaaaggaggc
tatcttagcgatggagactcacctgaactcctgccaaagggtcaggggtcgaaaggctca
cctacaccacaggattcactcgctgtggcagacgcggagtctttccgcttgtactcgctg
acggatcagcctcgctgtgctcagagactctcaggactgctcacggtgcatttgctggga
gtcgaagagctactccgaccacctcggatcgacgctactaaagaagtcttctgtgccatt
caagtggacggggtgacccgggctcgaacgtccctgctaacttgtcgaggagcgtgtctc
ccactaaaccacacctttaacctggagctcgagagggcccggctgctcaaactggtcatc
ttgacgccaacgactgctagcgctaacatcgggtcttgcgcactggctgctcccgcgcgg
aaccgggtttgttgtctgggtgcagtggctataccgtccctcttcaaggcttctcgcagt
cagcagctgtgtgttcgtctggagcctcgtggtttgctgtatgtgaagctgaccctgctg
gagcagttcgtgaccccgttcccgcgcctcagtgacctgccgccccctacagtgttcggg
gtagagctgcgccccctggtggagaaagaagcgtctgcgctcggagtgcctctgatcatc
cagaagtgtgtttctgagatcgagaggaggggactgagggtggtggggttgtatcgtctc
tgtggttctgcggcagtgaagaaggaattgcgcgatgcgtttgagaaggacagtgccgca
gtttccttaaacgacgagctctatcccgacgtcaatgtcattaccggcatcctgaaggac
tacctgcgcgagctgccgtctcctctgatcacgaggaccctgtatgaggtggtgttagag
gccatgatggttcggccggcctgtagacacgacagcgacgctccgcgctcacaggacacc
gtggctctgttgcagtgtcttcctgaagcggagaaggcaactctgtccttcttgctggat
catctgagtctggtggcgtcgtacagcgacagcaaccggatgacgtgccagaatctggcc
gtgtgcttcgggccggttctcctgacgcccacacaggagtcctggcaggccgggctgacg
gccccggggtcaggggccctgatggggtcaggggccgctcgagggcgtagctttgcacac
agtgaagagatcgccagcgccgtggactttaaacgacacatcgaggctttgcactacctc
ctgcagctctggcctgtacccaaagatcgagtgattgatgactccgaccaatcacaggtc
atctcttctccggtatcccagagttcctcactgtggcaatcgcttccctcggttcaggac
gagccggttgtttcccgtagggggcgtggccttcaggacgagccggttgtttcccgtagg
gggcgtggccttcaggacgagccggttgtttcccgtagggggcgtggccttcaggacgag
ccggttgtatcccatagggggcgtggccttcaggacgagccggttgtttcccataggggg
cgtggccttcaggacgagtcggttgtatcccatagggggcgtggccttcaggacgatccg
gttgtttcccgtagggggcgtggccgcctggaaagtccgccctgtaaccgatacgctggt
gactggagcgtttgtgggcgggacttcatgtcgaacgacgaggcggattacgacgaggtg
gcgggaagcgagagcgacgacgacatggacgaggcgaagaagcgggacgtgtgggcgtcg
cccgacggtttgttcgtggatgacttcgctctcgacttcgacgccccgttcacgtgccga
ctgagtctgaaggacttcgacacactgatttcagacttggagagagagttagccaaacaa
atcaatatctgcctctga
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integrated database retrieval system
