Pimephales promelas (fathead minnow): 120462604
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Entry
120462604 CDS
T08155
Symbol
chsy1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pprm01100
Metabolic pathways
Module
pprm_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
120462604 (chsy1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pprm01003
]
120462604 (chsy1)
Enzymes [BR:
pprm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
120462604 (chsy1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
120462604 (chsy1)
Glycosyltransferases [BR:
pprm01003
]
Glycan extension
O-Glycan
120462604 (chsy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Galactosyl_T
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
120462604
NCBI-ProteinID:
XP_039507133
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MAGRSRRSWFSVLLGLVVGFTLASRLILPRATELKKAGHKRRASGGTGGCGGGGGMMMMM
KKEYGGVLMPNTEKPAVPQSNSFLFVGVMTAQKYLNNRAVAAYRTWAKSVPGKVEFFSSE
GSDTTIPIPIVALQNVDDSYPPQKKSFMMLKYMHDHYLDQFEWFMRADDDVYIKSEKLES
FLRSLNSSEAIFLGQTGMGARDELGKLALEPGENFCMGGPGVIMSREVLRRMVPHIRQCL
QEMYTTHEDVEVGRCVRRFAGVQCVWSYEAGFDPSKDIGDTWPERKQSCLTSALGSRVLE
MIPVLNLSGTWAKSVPGKVEFFSSEGSDTTIPIPIVALQNVDDSYPPQKKSFMMLKYMHD
HYLDQFEWFMRADDDVYIKSEKLESFLRSLNSSEAIFLGQTGMGARDELGKLALEPGENF
CMGGPGVIMSREVLRRMVPHIRQCLQEMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFY
ENYEPNKKGYIRDLHNSKIHRAITLHPNKNPPYQYRLHSYILSRKIAELRHRTIQLHREI
VQMSRYSNTEVHKEDLQLGMPPSFMRFHPHQREEVLEWEFLTGKYIFSSSDGQPPRRGID
SSQKMALDDIIMQVMEMINANAKTRGRVIDFKEIQYGYRRVNPMYGAEYVLDLLLLYKKH
KGKTMTVPVRRHAYLQQTFSKIQFLEDEEMDARVLAARINQDSDSLSFLSNSLKMLVPFK
LSGPGVEQHEPKEKKINILVPLAGRYEIFVRFMANFEKICLIPNQNVKLLILLFSTDNNT
ERIKQIELMREYHMKYPKADMEIKPVSGPFSRALALEVGSAHFTNDSLLFYCDVDLLFTP
DFLTRCRGNTILGEQTYFPIIFSQYDPKVVYAGKVPSDNHYVFTSKTGLWRHYGFGIVCV
YKGDLVKAGGFDVSIQGWGLEDVDLFNKFIQSGIKLFRSTDTGIVHVHHPVVCDPNLDPK
QYKMCLGSKASSHGSTQQLAELWLEKNNHSFQKISNSNNESMRTE
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagaagtcgcagatcgtggttcagtgtgttgctgggtctggtagttgggttc
acactggcgtccaggctcatcctgccccgggccactgagctcaagaaagcgggtcacaag
cggcgggcgagcggtggcacgggcggctgcggaggtggaggagggatgatgatgatgatg
aagaaggagtatggaggggtgctgatgcccaacacggagaagcccgcggtgccccagtcc
aacagtttcctgttcgtgggcgtcatgaccgcgcagaagtacctgaacaaccgtgccgtg
gcagcttatagaacctgggccaagtctgttccaggcaaagtggagtttttctccagcgag
ggttctgacacgacgatcccaatccccattgtggctctgcagaacgtggacgactcgtac
cctcctcagaaaaagtccttcatgatgctcaagtacatgcatgaccactacctggaccag
ttcgagtggttcatgcgagccgacgacgacgtctacatcaaaagcgagaagctggagagc
tttctgaggagtctgaacagcagcgaggccatctttctcggccagacgggcatgggcgcc
cgcgacgaactgggcaagctggccttggaaccgggggagaacttctgcatgggcggccct
ggtgtcatcatgagccgtgaggtgctgcgcaggatggtgccccacatccgccagtgcctg
caggagatgtacaccacccatgaggacgtggaggtgggccgctgcgtgcgccgcttcgcc
ggggtgcagtgcgtctggtcctatgaggcaggctttgatccttcaaaggatattggtgat
acctggccagagcgcaaacagtcttgtctgacctccgctttgggctcgcgggtacttgag
atgattcctgtgctcaatttaagcggaacctgggccaagtctgttccaggcaaagtggag
tttttctccagcgagggttctgacacgacgatcccaatccccattgtggctctgcagaac
gtggacgactcgtaccctcctcagaaaaagtccttcatgatgctcaaatacatgcatgac
cactacctggaccagttcgagtggttcatgcgagccgacgacgacgtctacatcaaaagc
gagaagctggagagctttctgaggagtctgaacagcagcgaggccatctttctcggccag
acgggcatgggcgcccgcgacgaactgggcaagctggccttggaaccgggggagaacttc
tgcatgggcggccctggcgtcatcatgagccgtgaggtgctgcgcaggatggtgccccac
atccgccagtgcctgcaggagatgtacaccacccatgaggacgtggaggtgggccgctgc
gtgcgccgcttcgccggggtgcagtgcgtctggtcctatgagatgcagcagctgttctat
gagaattacgagccgaacaagaagggctacatccgtgatctccacaacagcaagatccac
cgggccataacccttcaccccaacaagaatcctccataccagtatcgcctgcacagctac
atattgagccgaaagatcgctgagctgcgccaccgcaccatccagcttcaccgcgagatt
gtgcagatgagccgctacagcaacactgaggtgcacaaggaagacctccaattgggcatg
cctccttcgttcatgcgcttccatccccaccaacgtgaggaggtgctagaatgggagttc
ctcacgggcaagtacattttctcgtcctcggacggacagcctccacgccgaggcatcgac
tcctcgcagaagatggcgctggacgacatcatcatgcaggtaatggagatgattaacgcc
aatgccaagacgcgaggtagagtcatcgactttaaagagatccagtatggataccgaagg
gtgaaccccatgtacggggcagagtacgtactggatttgctgctgctctacaagaagcac
aaggggaagaccatgacggtacccgtgaggaggcatgcttatcttcagcagaccttcagc
aaaattcagttcctggaagatgaggagatggatgcccgagtgctggctgctaggatcaac
caggactcggactcgttgtccttcttgtccaactctctcaagatgctcgtccctttcaag
ctgagcggcccaggcgtcgaacagcacgaacccaaagagaagaagatcaacatccttgtg
ccgctggcgggacgctacgaaatctttgtgcgcttcatggccaactttgagaagatctgc
ctcattcccaaccagaacgtcaagttgctgattcttcttttcagcacagacaacaacaca
gagcgtattaagcagatcgagctcatgagagagtatcacatgaagtatccaaaagccgat
atggagatcaagccggtctctggccctttctcccgtgctctggccctggaggtcggctcg
gcccactttaccaatgattccttactcttctactgtgacgtggacttactgtttactccc
gacttcttgacccgatgtcgtgggaacaccattcttggggaacagacgtactttcccatc
atctttagccagtacgacccaaaggttgtctacgcgggcaaggtgcccagtgacaaccac
tacgtgttcacatccaaaacgggcttgtggagacactacggttttgggatcgtctgtgtc
tacaaaggagacttggtcaaagcaggtggctttgacgtctcaatccaaggttggggactg
gaggacgtggacctctttaacaaattcatccagtccgggatcaagctgttccgcagcacg
gacactggcatcgtgcatgtccaccaccccgtggtttgcgaccccaacctagatcccaag
cagtacaaaatgtgcctgggctccaaagcatcctcgcacggctccacgcagcaacttgcc
gagctgtggttggagaagaacaaccacagcttccaaaagatctcaaactctaataacgaa
tcaatgaggacagaatag
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integrated database retrieval system
