Pimephales promelas (fathead minnow): 120462664
Help
Entry
120462664 CDS
T08155
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120462664
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
120462664
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
RuvA_C
Motif
Other DBs
NCBI-GeneID:
120462664
NCBI-ProteinID:
XP_039507224
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MQQSRCFQHPPAGLSRDTHDLQTKVDFFRKLGYSPEEVKAALRKLGLGTDTNAVLGELVR
SGAKTVPSSSSDSDDGLPQWGGSSSRGQGSTPEDNSEPESDLKPIVIDGSNVAMSHGNKE
VFSCRGIELAVNYFLDRGHRNITVFVPSWRKEQPRPDVPISDQHILEELERKKFLVFTPS
RRIGGKRVVCYDDRFIIKLAHDLDGIIVSNDTYRDLQSERPEWKRCIEERLLMYSFVNDK
FMPPDDPLGRHGPNLDNFLRKKTLLLDHKRQLCPYGKKCTYGIKCKFYHPERTNQSQRSL
ADELRENARLSGSKEDSRINGRGMHPRNDPRFESSSPSLEQELEQKLRLEPKSSDSRGVM
LNNWDDILSMKKPLNRAPVGQHSSLVDRTSLQTPFPTNPSSIFSSDSGLGSYESLFSELS
QSIDDSHRMRSSHPPLSGIPTTPASGQRYYDNMSPYSNFHPNYSAYSSLPLANPVQSYSL
PAYAGWSYPLYLPQASSLPEPLPCPSSHRSSNDYGSQQHSGMPQPSAFQEEREEVRKKLH
AIFNPHHVNKVMEIFPQLNDAQQLAAEILKLKSRGDF
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagtcgaggtgtttccagcatccgcccgcgggcctgagtcgggacacacacgac
ctgcagaccaaggtggacttcttccgtaagctgggctactctccggaggaggtgaaggcc
gcgctgaggaagctgggactggggacggacaccaacgctgtgctgggtgaactggtgcgg
tccggggcgaagaccgtgccctcctccagctccgacagtgatgatggcttgccccagtgg
ggggggagctcatcccggggtcaggggtcaacgccggaggacaacagtgagcctgaaagt
gacctgaagccgatagtcatcgatggcagtaatgtggccatgagtcatgggaacaaggaa
gtgttctcatgccgagggattgagctggcagttaactacttccttgaccgaggacacaga
aatatcactgtgtttgtgccttcctggagaaaagagcagcccaggcctgatgtacctatt
tcagatcagcatattttggaagagctggaaaggaagaagtttctcgtgtttacaccttca
cggaggattggaggaaagcgtgtggtctgctatgacgatcgctttattatcaagttagct
catgacctggatggcatcatagtgtccaacgacacgtatcgtgacctgcaaagtgagcgt
ccggagtggaagcgttgcattgaggagagattgcttatgtactcctttgtaaatgacaag
ttcatgccgcctgatgacccactcggccgtcacggacccaacttggataattttcttcgg
aaaaaaacgttgttgcttgaccacaagcgccaactctgtccatatggaaaaaagtgcaca
tatgggatcaagtgcaagttctaccacccagagcgcactaaccagtcacagcgctctcta
gccgacgagcttcgagagaatgccagactgtctggatctaaagaggacagcagaataaat
gggagaggcatgcacccaagaaatgaccccaggtttgagtccagttctccctccttggag
caagaacttgaacagaagctcagattggagcccaagagctctgacagcaggggtgtcatg
ctcaataactgggatgatattttgtccatgaaaaagcctttaaacagagccccagtggga
cagcacagttctctggttgacagaaccagtctgcaaacacctttcccaacaaacccttcg
tccattttcagctcagactctgggcttggatcctatgaaagcctgttttcagaactatcc
cagagcattgacgactcgcataggatgagatcaagtcatccaccgttgtctggtatccct
accacacctgcaagcggccagcgctactacgacaacatgagcccttactccaactttcat
cccaactatagtgcctacagctccctacctcttgccaaccctgtccagagttacagtctt
ccagcttatgcgggctggtcttaccctctctacttaccacaggcgagcagtttgcccgaa
cctttaccctgccctagctctcacaggtcttccaatgactacggaagccagcagcactca
ggcatgccacagcccagcgctttccaggaagaaagagaggaggttaggaagaagcttcat
gcaatttttaacccacatcatgtaaacaaagttatggaaatattcccacagctgaatgac
gcacaacagctggctgcagagattcttaaactcaagtccaggggagacttttga
DBGET
integrated database retrieval system