Pimephales promelas (fathead minnow): 120462739
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Entry
120462739 CDS
T08155
Symbol
chl1a
Name
(RefSeq) cell adhesion molecule L1-like a isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120462739 (chl1a)
Cell adhesion molecules [BR:
pprm04515
]
Immunoglobulin superfamily
L1 family
120462739 (chl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
VEGFR1-3_N_Ig-like
Ig_PDGFR_d4
ICAM_N
Ig_ANOS1
Motif
Other DBs
NCBI-GeneID:
120462739
NCBI-ProteinID:
XP_039507319
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MKGLGSLSVRLLSAFFSTTFGLYFPPQVEQLPTITAQTSGSLIALPYDENILFKCEAKGN
PRPTYRWTKDGMDFDPHKDPRLIKKESSGTFEIPNNKDKVKYRGKYRCYASNKLGTAISE
EAELIVPVVPKFPKVTTEPLVVTEGESVVLECNPPQGIPPWQLYWMTKDLRHIEQNERVS
MGLNGNLYFSNTLLSDSHDDYCCFASFSRIRTIVQKPRMALKVKPINSSQGDDGIMSVQE
RKPNILVPSSHSTTFLKKGEELELECIAEGLPTPKVEWIRDNLPKRSLIKNFGKVLTIPN
ITELDEGKYMCKAKNDLDEAVRHFNIVVEEPPSWQEEPVKSQLAEIGSDIHIKCSAMGKP
QPTITWKRNGQPLDDFPSTSHRVLDDRIIILRAEERDTAVYQCEASNKHGTILANTNVLV
MNHPPLILTQNYLEYATMLGKSVIMDCKVFSSPPAALNWRREDPEGSVDGERYSLLKNGS
LQIHKVEMEDMGQYKCSASNSEGTASITTELFIKDSTRIVEPPQDIKVVRGSMAELECQV
ECDPTLRRQLEILWMKDGINILSNFSEKYFAEDGILQIFNVSNSGQGKYTCIVQTPLDQD
TASAYITVLDVPDPPVQLTLTDLKDRSVRLNWAAAGDHNSPITEFIIQYEENHWEPGTWK
ELLRVASSQFSAPLTLYGHINYQFRVIAVNAIGRSHPSLPSERYKTPPCAPDRNPENIKI
EGHLPHQMDISWEPLLPVEHNGPGLEYKLSYRLLGVEDSWKEQMVKRHSFVVRDTPTFIP
YEVKIQAFNHHGWAPEPRTVTGYSGEDLPLAPPGDVSVEVLNSTLLRVSWSPVPQTTLRG
HLGGYTVHWWRTQSLLTSESIPSERQSLNIPGNRSHTIVPGLKPFSKYNLTVNVFNRRGN
GPSSSPISFTTPQGVPKKPYDLKATNFQKDSIKLVWAPPLETNGFLTGYLLQYQTVNETV
GKLISVNISAPDTTDWVLHDLQEDNWYKFYLRACTQVGCGSAISEEGSTVPEAFTMPENS
LAEVSTVSAETSTESYELSTSEVTSSELRQPFSFTSPNTDTPSVNAIFPTLVVLNISTFV
SDTSARISWRTSGERSDSQLYVAIMNHRDGIWQLSEALNTSKGFHTVEGLSPGTVYTVRL
QASHGVDGPSIFEEVFKTRKVSSKQAAGSQEWFVGMLCAVALLTLLVLIGCFVLKNKGGK
YAVKEKEESPADVESQGLEEETPCEYSDNDEKPLKSSQQLLRDVNEDDSSEDCSVISDDE
DCDFNEDGSFIGEYSGHKRRVSMEVNGHAPGTS
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggctcgggagcctaagtgtcaggctcctgtcggccttcttctccactaccttt
ggtctttatttccctcctcaagtggagcagctgccgaccatcacggctcagacctcaggc
tctctcattgccttgccatatgatgagaacatcctgttcaagtgtgaagccaaaggcaac
ccaagaccaacgtaccgctggacaaaagatggcatggatttcgacccacataaagacccc
cggctgattaaaaaagaaagtagtgggacttttgagataccgaacaataaagataaagtg
aaataccggggaaagtacagatgttatgcctctaacaagctcggaactgcaatatcagag
gaagcagaattgattgtgcctgtggtacccaagtttcccaaagtgacgacagagccattg
gtggtcacagagggcgaatcagtggttttggagtgtaacccgccacaagggattccacca
tggcagctgtactggatgaccaaagatcttcggcacattgagcagaatgagagggtgtcc
atgggcctcaatgggaatctgtacttctcaaatacactgctgtctgacagccatgatgac
tactgctgttttgcctccttttccaggatacgcacaattgttcagaaaccccgcatggcc
ctgaaggtcaagccaataaattcaagccaaggggatgatggcatcatgagtgttcaggag
agaaagccgaacattttggtgccctccagtcattcaacgacattcctaaaaaaaggagaa
gagctggagctggagtgtatcgcagaaggactgcctacaccgaaggtagaatggatacgg
gataatttaccgaagcgctctcttatcaaaaactttggaaaggttctgactataccaaat
atcacagaactggatgaagggaaatacatgtgcaaagcaaagaatgatcttgatgaagct
gtgcgtcatttcaacattgttgtggaagagccgcccagctggcaggaggagccagtgaag
agtcagttagcagagattggatctgacatccacatcaagtgttcagctatgggaaagcca
caacccacaatcacctggaagagaaacggccagcccctcgatgatttcccttctaccagt
cacagagtgcttgatgacagaataatcattctcagagcggaggagagagacactgcagtg
taccagtgtgaagcctccaacaaacacgggaccatacttgccaatacgaacgtgcttgtc
atgaatcatcctcctttgattctgacgcagaattatctggagtacgcaaccatgttaggc
aagagtgtgattatggactgcaaagtctttagctcaccacctgccgcccttaactggaga
agagaagacccagagggctctgtagatggagagagatattctctcctgaagaatggctct
ctgcagattcacaaagtggagatggaagatatgggccagtacaaatgttcggcaagcaac
tctgagggcaccgccagcatcaccactgaacttttcatcaaagattcaactaggatcgta
gaacctcctcaagacataaaggtcgtaagaggatctatggccgagctggagtgccaggtg
gagtgtgaccccaccctcagaagacagctggagatcttgtggatgaaggatgggataaat
atcctctccaacttctcagaaaaatatttcgcagaggatggaattctccagattttcaat
gtgagcaacagtggtcaagggaaatacacctgcattgttcaaacgccactggaccaggat
acagcttctgcatacataactgtgttagatgtccctgatccaccggttcaactgacgctc
accgatctgaaagaccgcagcgtgaggctcaactgggcggctgctggtgatcataacagt
cccataacagagttcatcatccagtatgaagagaaccactgggaacccgggacgtggaag
gagcttctacgagtggctagcagccagttctcggcccccttgacactctatggccacatt
aactaccagttcagagtcatcgctgtcaatgctatagggagaagtcatcccagcttgcca
tccgaaagatataagacgcctccttgtgctcccgacaggaacccagaaaacattaagatt
gagggtcacctgccacatcagatggacatcagctgggagccgctcttgcctgtggagcac
aacggtcccggtctggaatacaaactgagctacaggctcctgggtgtcgaggacagttgg
aaagaacagatggtgaagagacactcatttgtggtgcgagacaccccaacgttcatcccc
tacgaggtcaagatccaggccttcaaccaccacgggtgggcaccagaaccccgaacggtg
actggttattccggggaagacttgcccttggcgcctcctggggatgtatctgtggaggtg
ttgaactctacactgctgagggtcagctggtcaccagtgccccaaaccaccctgaggggc
catcttggaggatacactgtgcactggtggcgaactcaaagtctgttgacctctgagagt
attccctcagagagacagtctctcaatatccctggaaacaggagtcacaccatagtgccg
ggactaaagccattctctaaatataacctgactgtcaacgtctttaaccgaagagggaat
gggcccagcagcagtcccatctctttcacaactccacagggagttcctaagaaaccttac
gacctgaaagccacaaactttcagaaagactccatcaagttggtgtgggcgcctccactc
gaaaccaatgggtttctcacgggatacttgctgcaataccagacagttaatgagactgtg
ggtaagctgatctctgtgaacatcagtgcaccagatactacagattgggtcttgcatgat
ctacaggaagacaactggtataagttctacctgagagcgtgtacgcaagtgggctgtggg
tcagccatcagcgaggaaggaagcaccgtccccgaagcatttactatgcctgaaaattca
cttgctgaagtttccacagtctcagctgagacttcgaccgagagctatgaactgtcaaca
tctgaagtgacatcatccgagttgaggcaacctttctctttcacctcacctaatacagac
actccttctgtcaatgccatatttcctaccttagttgttctcaacatatccacctttgta
agtgacacctctgcaagaatcagctggagaaccagtggggaacggtctgattcacagctc
tatgttgcaataatgaatcaccgtgatggtatctggcagctttcagaggctttaaataca
tctaaaggtttccacaccgttgaagggctcagcccgggaactgtgtacacagtccggctg
caggcttcacatggggttgatggccctagcatttttgaagaggttttcaagactaggaaa
gtgtctagtaagcaagcggcgggatcccaggagtggtttgtggggatgttgtgcgcggtg
gctttactgactctactcgtcctcatcggctgttttgtgctcaagaacaaaggcggcaag
tatgcagtgaaggaaaaggaggagtctcccgctgatgtggaatctcaaggcctggaagaa
gaaaccccctgcgagtacagtgacaatgacgagaagccgttaaaaagcagccagcaattg
ctcagagacgtcaacgaggacgatagcagtgaagactgctctgtgatatcagacgatgag
gactgcgacttcaacgaagacgggtcgttcatcggcgagtactcgggacacaagcgcagg
gtgtccatggaggtgaacggacacgcccctgggacttcttaa
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