Pimephales promelas (fathead minnow): 120462743
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Entry
120462743 CDS
T08155
Symbol
dhx32a
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32a
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120462743 (dhx32a)
Enzymes [BR:
pprm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120462743 (dhx32a)
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120462743 (dhx32a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
120462743
NCBI-ProteinID:
XP_039507335
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MAGNSEISEGELKREEEEESDCDLFEFGDDLELNQFDGLPYSSRYYRLLQERKTLPVWKY
RHEFMTLLEKNQIIIVSGTTRTGKSTQIPQWCAEFCLSAQYRNGVVVCSQIQRRQAVDLA
LRVADEMDINIGHEIGYSIPLETCCSNDTILRYCTDDVLLREMMSDPMLEHYGVVVIDQA
HERTVSTDVLLGLLREVLLQRPELRVVVLSAPPAADTLFTHYGNVPRLQVEAPGAGEVIH
SNSSGSESFYSALRLALEVHRSREPGDVAVFLASEQEVACACNILTKEASRMSASLGELL
VVPLFPGHTGICPPITESLQTSRRVFISCSQSEDLFWPVDTISFVIDTGVEKRFVYNPRV
RASSEVTRPISRCQAEIRKRLTGSTGKCFCLYPEDLQLPAEIPPRILDSNITSTALFLKR
MEVAGIGHCDFISRPDPEGLMQALEELDYLAALDNDGNLSEMGIIMSELPLDPQMAKALL
ASCEFDCASEMLTIAAMLTAPSCFIEPPVGMVTEVMRCHMKFQHPEGDHFTLINIYNTFK
RSQKEPYFSQEQWCEEYFLSCASLQTADAIRAQLTDILKRIELPLSEPAFGTKTNALNIK
RALLAGYFMQIARDVDGSGNYFMLLNKHVAQVHRLSGYGAKAHKLGLPEWVLFHEYNLSD
NNCIRTVTHISPQAFTQMAPQYFFCNLPPSESKEILQLILDSDRTGRVRAKPQPAAPQTE
EAESHDRCVIQ
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaacagtgagatatcagaaggagaactcaagagagaggaggaggaggaatct
gactgtgatctgttcgagtttggagatgatctggagctcaatcagtttgatgggttgcca
tactcgtccagatactacagactcctgcaggagaggaaaactctgcctgtgtggaaatac
agacatgaattcatgactctgctggaaaagaatcagattattatagtttcaggaacaacc
aggactggcaaaagcacacagatccctcagtggtgtgcagagttctgtctgtctgcgcag
taccggaacggtgtggtggtgtgcagtcagatccagagacgccaggctgtagatctggcc
ctccgcgtcgcagacgagatggacatcaacatcggccacgagatcggatacagcatcccg
ctggagacgtgctgctccaacgacactattctcaggtactgcactgatgacgtactgctg
cgtgagatgatgtcagacccgatgctggagcattatggggtggtggtgatagaccaggcc
cacgagaggaccgtgagcacggatgttctcctgggtctgctccgagaggtgcttctccag
cggcccgagctgcgagtggtggtcctgtccgcgccgcccgctgcagacactctcttcaca
cactacgggaacgtcccgcgcctgcaggtggaagccccgggcgccggtgaagtgatccac
agcaacagcagcggttcggagagcttctattcggctctgagactcgctctggaggtccat
cgatccagagagcctggagacgtggcagtgtttttagcttctgagcaggaggttgcgtgt
gcctgtaatattctcactaaagaagcgtccagaatgagtgcatctctgggagagctgtta
gtggttcctctgttccccggacacacaggaatatgtccaccaatcacagaaagcctacaa
acaagtagacgggtcttcatttcctgtagccaatcagaggatctcttctggccggtggac
accattagttttgtcattgatactggagtagagaagagattcgtatataacccacgagtg
agagccagttcagaggtcacccgacccatcagtagatgtcaagctgaaatccgcaaacgc
ctgactggatcaaccgggaagtgcttctgtttgtatcctgaggaccttcagctgcccgct
gagatccctcctcggatcctggattcaaacatcacgtccactgcgctcttcctgaagagg
atggaggtggccggcatcgggcactgtgacttcattagcagacctgatccggaggggctc
atgcaggcgttggaggagctggattatcttgctgctttggacaatgatggaaacctctct
gagatgggcatcatcatgtcagagcttcctctggatccacagatggccaaagctttgctg
gcgtcctgtgagtttgactgtgccagtgagatgctaaccatcgctgcaatgctcacagca
ccaagctgcttcattgagcctcctgttggcatggtaacagaagtcatgcggtgtcacatg
aagttccagcatcccgagggcgaccacttcaccctgatcaacatttacaacaccttcaaa
cgcagccagaaggaaccatatttcagccaggagcagtggtgtgaggaatatttcctgagc
tgtgcctcgctgcagacggcagacgccatcagagcccaactcactgacatcctgaagagg
atcgagcttcccctctccgaaccggcctttggcaccaagaccaacgcgctcaatatcaag
agggcgctgctcgccggctacttcatgcagatcgccagagacgtggacggctcggggaat
tacttcatgctgctgaataaacacgtggctcaggttcaccgtctgtctggttacggagca
aaggctcataaactgggtctgccggagtgggttctgttccacgagtacaacctctccgac
aacaactgcatccggaccgtcacacacatctcgccgcaggcgttcactcaaatggcacca
cagtactttttctgtaacctgccccctagtgaaagcaaagagatcctgcagcttattctg
gacagcgacaggacggggcgcgtgagagcgaagcctcaaccagctgcgccacagacggaa
gaggccgaatcacatgaccgatgtgtcatacagtga
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integrated database retrieval system
