Pimephales promelas (fathead minnow): 120462784
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Entry
120462784 CDS
T08155
Symbol
nr1d2b
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2b
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120462784 (nr1d2b)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprm03310
]
120462784 (nr1d2b)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120462784 (nr1d2b)
Nuclear receptors [BR:
pprm03310
]
1. Thyroid hormone like
1D. Rev-Erb
120462784 (nr1d2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120462784
NCBI-ProteinID:
XP_039507390
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MESTKAGGVIAYISSSSSDSCLSDSSNSSYQSCSPPHAGPGQQGEALPVASQSRPPRHGG
GKARSPSTTKSGITKINGLVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKC
LKNESCPIMRINRNRCQQCRFKKCLLVGMSRDAVRFGRIPKREKQRMLLEMQNAMNNMMS
NGHGNQPLPLSNQTSASDGSSEDSDGRSSRSNPSKTSPDPELLIAMDTSQSSDSFSATDS
GEEEAIGTLTRAQQETFMYNQEQGSVPSEAPSTYSYFTEKTQEVWNRQNDTSSSSEPKPQ
SSGAAQGTEDAGPHHGCPVRADGSSLQNLQTFGRLNRMHLVCPMNTSPYVDPQKSGHSIW
EEFSMSFTPAVREVVEFAKRIPGFKDLSQHDQVSLLKAGTFEVLVVRFTSLFDVKERTVT
FLSGRKYSVDALRSLGAGDLLNSMFDFTEKLRALNLGEEEISLFTAVVLVSADRSGLENV
NSVEALQETLIRALRSLITKNHPNEIAIFTKLLLKLPDLRSLNNMHSEQLLAFKVQP
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaatccacgaaggccggtggggtaatagcttacattagctcctcgagctcggactcg
tgcctcagcgactcctccaacagcagctatcagtcctgctcgccgcctcatgcagggccg
ggtcagcagggcgaggcacttcctgtggcctctcagtcccgcccaccgaggcacggcgga
gggaaggcacggtcaccctccaccaccaaaagtggcataacaaagattaacggcctggtg
ctgctatgtaaagtgtgtggagatgtggcgtcaggatttcactacggcgttcacgcttgt
gagggatgtaagggtttcttcaggaggagcattcagcagaacattcagtataagaagtgc
cttaagaacgaaagctgtcccattatgcgcatcaacaggaaccggtgccagcagtgccgt
tttaagaaatgtttgctcgtgggcatgtccagagatgcggtgcgctttggccggattccc
aaacgagagaagcagcgcatgctgctcgagatgcagaacgcaatgaacaacatgatgagc
aacggccacggcaaccagcccctgcctcttagcaaccagacttcagccagcgacggatct
tccgaggacagcgatggccgttcctccaggagcaacccctccaagaccagccctgacccc
gagctgctgatcgccatggatacgagccaaagctccgactccttcagtgccaccgacagc
ggcgaggaggaggccatcggcacacttactagggcacagcaggagaccttcatgtacaac
caggagcagggcagtgtgccttctgaagccccgagcacctacagctatttcactgagaag
acccaggaggtctggaaccggcagaacgacacatcctcatcgagcgaaccgaagccacag
tcgagcggtgctgcgcaggggactgaagacgccggcccacatcacggctgtcccgtcaga
gccgacggatcatctcttcagaacctccaaacattcgggaggcttaacaggatgcacctg
gtttgccccatgaatacatcaccctatgtggatcctcagaagtcaggtcacagtatttgg
gaggagttctccatgagcttcaccccggctgtcagagaggtggtggaatttgccaagcgt
atcccagggttcaaagatctatcccagcatgaccaggtcagcctgctcaaggctggcacc
tttgaggtgctggtggtacgctttacatccctgttcgatgtgaaggagcggacggtcacg
tttctgagtggcaggaagtatagcgtggatgctctgcggtctttgggggccggagatctc
ctcaactcaatgtttgacttcacagagaagctgcgggcgctgaacctcggcgaggaggaa
atcagcctcttcacggccgtagtgctggtgtctgcagatcgctctggcctggagaacgtc
aactccgtcgaggcacttcaggaaactctgattcgagctctgcgcagcttgatcaccaag
aaccaccccaacgagattgccatcttcactaaactgcttctcaaacttcccgatctgcgc
tcgctcaacaacatgcactccgaacagctcctggccttcaaggtccagccctga
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