Pimephales promelas (fathead minnow): 120463059
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Entry
120463059 CDS
T08155
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04514
Cell adhesion molecule (CAM) interaction
pprm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120463059 (l1cama)
04517 IgSF CAM signaling
120463059 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120463059 (l1cama)
04090 CD molecules [BR:
pprm04090
]
120463059 (l1cama)
04091 Lectins [BR:
pprm04091
]
120463059 (l1cama)
Cell adhesion molecules [BR:
pprm04515
]
Immunoglobulin superfamily
L1 family
120463059 (l1cama)
CD molecules [BR:
pprm04090
]
Proteins
120463059 (l1cama)
Lectins [BR:
pprm04091
]
I-type lectins (Siglecs)
120463059 (l1cama)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
Bravo_FIGEY
Pur_ac_phosph_N
Ig_5
C2-set_2
VEGFR1-3_N_Ig-like
V-set_CD47
Sp38
Tissue_fac
Ig_MYOM1
YchO_Ig
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
120463059
NCBI-ProteinID:
XP_039507781
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MPATSLQQVGSRGRCAALLLPLLLLSVAPRPGDTMINIPSKYKIRHLKTPPVITAQPESI
TTFSADDITLTCEATGNPQPTFRWVKDGLEFDPSKDPDLSVSRDSGTFSLTAKDGPIHQY
QGRYNCYASNELGTAVSKEARIITENTPTLQKEKKVSKKVEEGESVVLPCNPPNSTVAPV
IHWMDKRLRHIQQNERVIQGRDGNLYFSHVTPADSRDDYTCNTQFPSAFIIQLKEPIKLT
VVPSNSVVRNRRPQMMQPTGSRSSYLVLSGQDLELECIVQGLPTPSIQWIRKDGVLSESR
TSTDSYNRVLRFKNISESDAGEYQCTATNLQGMISHTYSITVEAAPYWTKEPKSQLYAPG
ETVKLDCKADGIPSPEVTWSINGNLLTDIDPDPRRSLKHGVLTLKNVELSDTAVYQCKAA
NKHGSIIINAYVYVIELPPQILTEDVLMYSVAEGQTIDLACETFGSPRPNVTWEGESWGS
LIANPRMNPLSDGSLQISNASLNDSGLYTCTVSNSKITITAELAVLNKTFIVKPPLALRI
QRGKPATLTCEYQVDSRQGAPQVQWRKNQKKLTESSDSDKYMMDESTLIIPEVEDDDEGR
YTCEVITNLDMAEASGSITIVDRPDPPTQIQMTEPKERSITLSWTPGDDHNSPVLEYLIE
FEETGSERKEWEELSRVSGSIQRTTLPLKPFISYRFRIIAINDIGKSNPSKETEAYSTPA
APPDSNPEGVRSASIDPGTLVITWEELDRRSFNGPDFHYKVMWRKVLGSGPSWHTKNVSS
PPFVITDVGNFSAFDIKVQAVNEMGEGPEPKSAIGYSGEDTPLEAPLDVGVVLINSTAIK
VAWAAVNRETVRGRLKGYKIYLSHFDTESRHLRRERVREGKPSNVTIVTTDSNEEMMILG
GLQPYSHYSLNISAFNHKGEGPQSEALTFHTPEGVPGPPSFLQLESPSETEMILHWSAPN
QPNGVLTGYMLQYQQVDNEDTPMLVEKISDHAKNHFKLKLDPRSRYRFHLRGYTAAGEGL
PITMEGATTLDGGPPSNISLSIGETSVNLTWVSKERQRNVGFHIHYLRDGKGKWKHSEQV
NSSQSFYTLQGLQPGSLYYLRIDSGNKTIWKDEIQTAGTIEMEKQDGFVTESWFIGLISA
LVLLLLVLLILCFIKRSKGGKYSVKEKEEGQIDSEARPMNNEAFGEYRSLESDNEEKRTA
SQPSLCEDSKLCTDDALDDYANSNSVQTEVLMDESLASQSSGVRDVPDPETQESSPLNPA
TAISHHGLPNSAALLD
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccacgtcactacagcaggtgggcagcagggggcgatgtgctgctctcctgctc
cctctcctcctgctgtctgtggctccaaggcccggggacaccatgatcaacatcccatcc
aaatacaaaataagacacttgaaaacccccccagtgatcactgcccagccagagtctatc
accaccttttcagcagatgacatcacactcacctgtgaggcaactgggaatccccaaccc
acgttccgctgggtgaaagatggtttggagtttgacccctctaaagaccctgacctctca
gtgtccagagattctgggaccttctcattgacagccaaagatggacccatccaccagtac
cagggcagatataactgctatgcatctaatgagctcggcactgccgtgtctaaagaggct
cgtattatcacagagaacactcccactctacagaaggagaagaaggtatcaaagaaggtt
gaggaaggagagagtgtggtgcttccctgtaatcctcctaacagcaccgtggccccggtc
atccactggatggacaaaaggctgcggcatattcagcaaaacgagcgtgtgattcagggt
cgcgatggaaacttgtacttctctcatgtgactccggcagacagccgagatgactacacc
tgcaacactcagtttcccagcgcattcatcatccagctcaaagagcccatcaaactcacc
gttgtcccctctaactcagtggtgcgcaacagaaggccacaaatgatgcaacccactggc
tcccgcagctcctacctggtgctcagtggccaagacctagagctggaatgcattgttcag
ggcctgccgactcccagtatccagtggatcaggaaagatggagttctgtctgagtcacgc
acctccactgacagttataacagagttctgcgctttaagaatatctcagagtctgacgct
ggcgaataccagtgtaccgccaccaatctgcaaggcatgatctctcacacctacagcatc
actgtggaagctgccccatattggacgaaagaaccaaagagccagctgtacgccccggga
gagacggtcaaactggattgtaaggctgatggcattcccagccctgaggtcacctggagc
atcaatgggaaccttcttactgatattgacccagatccacgtcgcagtttgaaacatggt
gttctcaccctgaagaatgtggaactcagtgacactgcggtgtatcagtgcaaagctgcc
aataagcacggatctatcatcatcaatgcttacgtctatgttatagaactgcctccccag
attctgacagaagatgtactcatgtactccgtggcagagggacagacgattgatctggct
tgcgagacctttggctctcctcggcccaatgtcacatgggagggcgagtcctggggctca
cttatagccaacccaaggatgaatccgttatccgatggctctctacagatcagtaacgcc
tccctaaatgacagcggcctgtacacctgcactgtcagcaacagcaaaatcaccatcact
gctgagctggccgtactcaataagacgttcattgtgaaacctccgttggctctgcgaatt
cagcgggggaagccagctaccctcacctgcgagtaccaggtggactccaggcagggcgcc
cctcaagtccagtggaggaagaaccaaaagaagctcacagagtcttctgattcagacaag
tacatgatggatgaatcaaccctcataatacccgaagttgaagatgacgatgaagggaga
tacacctgtgaagtcattaccaatctggatatggcagaagcaagtggctccatcactatc
gttgaccgaccagaccctccaacccaaatacaaatgaccgaacctaaagaacgcagtatc
actctcagctggacacctggagatgatcacaacagccctgtgctagagtatttgattgag
ttcgaggagacaggatctgaaagaaaggaatgggaggagctaagccgtgtgtcaggcagc
attcagcgaactacccttcccttgaagcccttcatttcttatcgtttccgaatcatcgcc
atcaatgacatcggcaagagtaacccgagcaaggaaacggaggcttattccacaccagct
gctcctccagacagcaaccctgaaggagtgcgcagtgcttccatcgacccaggcaccctt
gtcatcacatgggaggagttggacaggcgtagtttcaatggcccagattttcactacaaa
gtgatgtggaggaaagttttgggcagcggtccgtcctggcacaccaaaaacgtttcctct
ccacccttcgtcatcacagatgtgggcaacttctctgcctttgacattaaagtgcaagct
gttaatgagatgggagaaggtccagagcccaaatctgccattggatactctggagaggat
acccctcttgaggcccctctggacgtgggagtggttctgatcaacagcactgctattaaa
gtggcatgggcggccgtgaacagagaaaccgtgaggggccgtctgaagggttacaagatt
tatctgagccactttgacacagaaagcagacacctcagacgggagcgtgttagggagggt
aagccgtcaaacgtcacgattgtgacgacggacagtaatgaggagatgatgattctggga
ggtctgcagccctactctcattactcactgaatataagtgcctttaatcataaaggagaa
ggaccccagtctgaagccctcaccttccacactccagaaggagtacctggtcctccatcg
tttttacagctggaaagcccatcagagacagaaatgatactgcattggtctgcgcccaac
cagccaaatggagtcctgactggatatatgttacagtatcaacaagttgataatgaagac
accccgatgcttgtagaaaagattagtgaccacgccaaaaatcacttcaagttaaagctg
gaccctcgcagccgttaccgcttccacctgcggggatacacggctgctggagaaggactg
ccaatcaccatggagggagctaccacactggatggaggtccaccctccaacattagctta
tcgattggagagacatcagtcaacctgacctgggtgtcgaaagaaagacagaggaatgtg
ggattccatattcattacctgagagatggcaaaggcaaatggaagcactctgaacaagta
aacagctctcagtctttctacacgcttcaggggctccagcccggatcgctgtactacctg
cggattgactccggaaacaagactatctggaaggatgagatccagactgctggaacaata
gaaatggagaaacaggatgggtttgtgactgaaagctggttcatcggactcatcagcgcc
cttgtgctattactgctggtactgcttattctgtgtttcataaaacgaagcaaaggtgga
aaatactcggttaaagagaaagaagagggccagatagactctgaagctcggccaatgaat
aatgaggcttttggagagtacagatctcttgagagtgacaacgaggagaagcggacggcc
agtcagccgtctctgtgcgaggacagtaagctatgtaccgatgacgctctagacgactac
gccaacagcaacagcgttcagaccgaggtcctcatggacgagtcactggccagtcagagc
agcggagtccgagatgtccctgaccctgagactcaggaaagttcccctctaaatcctgcc
acagccatctcccaccacggcctgcccaactccgccgccctccttgactag
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integrated database retrieval system
