Pimephales promelas (fathead minnow): 120463103
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Entry
120463103 CDS
T08155
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04514
Cell adhesion molecule (CAM) interaction
pprm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120463103 (nfascb)
04517 IgSF CAM signaling
120463103 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120463103 (nfascb)
Cell adhesion molecules [BR:
pprm04515
]
Immunoglobulin superfamily
L1 family
120463103 (nfascb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
Ig_PDGFR_d4
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
A9CJY8-like_N
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
120463103
NCBI-ProteinID:
XP_039507867
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MLYTMRALRCWKIPAIFTILQQTWILAMEIPPEVRQPPMIIKESVRDHIVDPVDPIIVEC
EATGNPPPVFTWTRDGVYLNVARDPQVSMRRRSGTLEIFFWGRPDDYEGVYQCTATNEFG
SALSSHIHLRVSKARTWLKEYLEPVSVVVGLPLILPCNPPVGPPNPYTYWLNSTMTPIRQ
DRRVSKAENGDLFFSSIVAEDALTNYVCVARFPFTNTIQQKPPLILQVLTARMAAHTPPK
FLKPKGTVSTRIAMLGEELILECFAAGVPTPSIKWTKDWDEMSMTGKKLENFNKTLRIKK
IGMDDGGEYICTASNRMGSLDHVITVRVKSVPFWVEKPESLVLSRDDSGSIVCRADGIPR
PQIQWLVNGEPISDAPKSPGRQVSEDTLFFSAVVPDSAAVFQCNASNQYGYIMANAFLAV
MDMKPRLLSLRDELVKTTEGNNTHLDCPYFGSPKPDLRWSKGGLGTLEGNRHMIHPNGTL
EISDTKLQDQGTYVCVASNVIGRDEKEVQLEVKEPIKIVRAPRNTMVTRGSLARFDCKIK
FDSTLDVTVTWLKDKKFLILGRRMTKDEDSLSIADVYRRDEGIYTCRVKSELEEVTASAK
LTVTGTCTFTLSIHATSINMSILFMYTLILDRPDPPSDLEISDPSERSVRLTWIPGLSNH
NPIKEYQVQYTENLLADYWLLPSGWKNLTSYPGNLNSVVLQLTPFVEYRFRVIAVNGIGP
SKPSWPSAYYQTGGAVPDAIPRNIQGLGSGVFRNNMEISWEPLEYREWNGPKLGYTVWWR
RRDSREEWKNYTTYWWCSCIIYDTDTFTPYEIKVQAINFFGYGPESPIVLGYSGEDRPVA
APSDLSVSDIESTTLTVHWEPVARADIMGEIKEYKVYYWRESSRLPWHTVSRRIKTKSFK
ANGPRLSGTLSGLIPYSNYRMYIVVANNRFEGPPSHTIEFQTPEGVPTIPRSFRIMHRHY
DTIYLDWEEPAEPNGILTGYILKYQTLNMTLGDRIQVENIPPNITYFSLPRLDRYTRYKF
SLAAQTEVGVGEAFTEESPKFTTEEYTREQVDIVTQGWFIGLMCAVALLVLIMLIVFFIK
RSRGGKYPVRDMKDFALEPMDDRENGTFDYRSLERITRVSTMPYGRREEESRQGRSQGVI
EHIDRRTNSDDSLMEYGEGEEIEFNEDGSFIGEYTGVSKRNIDRSPYHDSSEPTSPVAIY
SFA
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacacgatgagagctctgaggtgttggaagattcctgccatatttacgatcctg
cagcaaacatggattttagcaatggaaattcctcctgaggtcagacaacctccaatgatc
attaaagagagtgtccgagaccacatagtagatccagttgaccccattatagtggagtgt
gaggcaaccgggaatcctcctccagtcttcacatggacacgtgatggggtttacctgaat
gtggcacgggatcctcaggtcagcatgaggcggcgttctggcacattagagattttcttc
tggggtcggcctgatgactatgagggagtctatcagtgcacggcgactaatgagtttggc
tctgctctgtccagtcacatccatctgcgtgtctccaaggcgcgtacgtggttgaaggag
tatctggagccagtatcagtggtggttggacttcctctcatccttccctgcaatcctcca
gtaggccctccaaatccctacacctactggctgaatagcactatgacaccaatccgacag
gatcgtcgagtatcaaaggcagagaatggagatctgttcttctccagtatcgtagcagaa
gacgctctcacgaactacgtctgtgtcgcccgcttccccttcacgaacaccatccagcag
aaaccgcccctcatcctgcaggtgctcacagctcgcatggcagcccatacgccacccaag
tttctgaagcccaagggaactgtcagcacaagaattgcgatgctaggggaagaacttatt
ttggagtgttttgctgctggagttccgactccctccataaaatggactaaagattgggac
gagatgtctatgactggaaagaagttggagaatttcaataagacgcttcgaataaagaag
atcggcatggatgatggaggagaatacatctgcaccgcttcaaacaggatgggcagcctg
gaccacgtcatcactgtccgggtcaaatcggtcccgttctgggtggagaagcctgagagt
ctggttctgtctcgtgacgacagcggtagtatagtgtgtagagctgatggtattcctcga
ccccagatacaatggctggtcaatggagagccaatcagtgatgctcctaagagtccaggc
aggcaggtttcagaagacactttgtttttcagcgccgtggttccagacagcgctgctgtg
ttccagtgcaatgcttcaaaccagtatggctatatcatggcaaacgctttcttggctgta
atggatatgaagcctcgtctgcttagtctcagagatgaactggttaaaacaacagaaggc
aataatactcatttagactgcccgtattttggctcacctaaacctgacctgcgatggtca
aaaggaggacttggcaccttagagggaaatcgtcacatgattcatccaaatggtacattg
gaaatcagtgacacaaagctgcaagatcagggaacatacgtgtgtgttgcaagcaatgtc
attggacgagatgagaaggaggtccaactagaggtcaaagagcccattaaaattgttcgt
gccccacgcaatactatggtcacaagagggagtctggctcgctttgattgtaagattaaa
tttgactcgactctggacgttaccgttacttggcttaaggacaagaagttcttgatttta
ggaagaaggatgacaaaggatgaggattctctgagcattgctgatgtgtacagaagagat
gaaggcatctacacctgcagggttaaaagtgaactggaggaggtcactgcctcggccaaa
ctcactgtgacgggtacctgcacatttactctctctatacacgcgaccagtataaacatg
agcatattattcatgtatactttgattttagaccggccagacccgcccagtgatttagag
atatcagacccatcagagaggagcgttagactcacctggattccaggactgagcaaccac
aatcctattaaagagtaccaggttcaatatactgaaaatctcctcgcagactattggctg
ctgccgagcggctggaagaacctgactagttacccaggcaacctgaactctgtcgtttta
cagctaactccattcgtagagtaccgattccgggtcattgctgtgaatggcataggtccc
agtaaacccagctggccatctgcatactatcagactgggggagctgtgcctgatgccatc
ccaagaaacatccaaggattgggaagtggagtattcagaaataacatggaaatcagctgg
gagccactggagtacagagaatggaatgggccgaaactgggctacacggtttggtggaga
cggagggattcgagggaggagtggaagaactacacaacatactggtggtgtagctgcatc
atctatgacactgacaccttcacgccctatgaaattaaagttcaggccatcaacttcttc
ggctatggcccagaatcccctattgtgcttggttactctggggaggaccgtcctgttgct
gctccatctgatctgagtgtgtcagacattgaaagcacgacgctgacagtccattgggaa
ccagtggcacgagccgacatcatgggtgaaataaaggagtacaaagtttattactggaga
gagagcagtcgactgccctggcacactgtgagcaggaggattaagaccaagagttttaaa
gctaatggaccacgtctgtctgggaccctatctggtcttatcccgtatagtaactacagg
atgtatattgtagtggccaataaccgctttgagggtccgcccagccacaccattgagttt
cagacacctgaaggagtgcccaccattcccaggtcgttcaggatcatgcaccggcactat
gacaccatttacctggactgggaggaacctgcagaacccaatggcattctgactggctat
attctcaaatatcagacgttgaacatgactctgggggacagaatccaagtggaaaacatt
cctcctaacatcacctacttctctctgccccgtttggaccgatacactcgatacaagttc
tcactggcagcacaaactgaagttggagtcggggaggctttcacagaggaatcacccaaa
tttactactgaggaatacacccgggagcaagtggacattgtgacgcagggttggttcatt
ggcttaatgtgtgcggttgctcttctcgttctcatcatgctcatagtcttcttcatcaag
agaagccgaggaggaaagtacccagtgcgggacatgaaggactttgcactggagccaatg
gatgatagagagaatggaacgtttgattacaggtctcttgagaggataacacgagtgtcc
actatgccctatggcagacgtgaggaggaaagtcgacagggacgcagtcaaggtgtgatc
gagcacattgacaggagaacgaacagtgacgacagcctcatggagtatggcgagggggaa
gagattgagtttaatgaggatggctccttcatcggagagtacactggtgtcagtaagagg
aacatcgacaggagcccgtaccatgatagctctgagcccacgtctcctgtggccatctac
tcttttgcttag
DBGET
integrated database retrieval system
