Pimephales promelas (fathead minnow): 120463107
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Entry
120463107 CDS
T08155
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120463107 (tfip11)
Spliceosome [BR:
pprm03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
120463107 (tfip11)
Other components
Complex C specific factors
120463107 (tfip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
120463107
NCBI-ProteinID:
XP_039507874
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MSMSHLYGRRGEEEEEDGVEIEKFEVTEWDLANEFNPERRRHRQTKEEVTYGIWAEHDSD
DERPSFGGKRAKDYSAPVNFVSGGIRKTAAEEKLEKEGSDDSNDSGDVPPPPPRTAVPKK
LQTGGSFKTSQRFAGGIRTGQDLGSWEKHTRGIGQKLLQKMGYIPGKGLGKNAQGIVNPI
EAKLRKGKGAVGAYGNERTQQSLQDFPVIDSEEEEEQEFQRELGQWRKDPGTTKKKPKYS
YKSVEELKAHGKLANKSMSRPAGELAQVKVIDMTGREQKVYHSYSHMSQKHSVPEEAPLS
VTTREQKSTGFALPELEHNLKLLIELTEQDILQSARRLQHEKDTVVTLTHESDALQVRLA
EEEESLGRLEQVMNLVESFEAGDTEGGSALSLQECAKVFQQLQTEFYQEYKTLGLGDIAV
SVVHPLLKEKLRNWDPLKDCSDGLEEVGQWRAILESSQSLHGGPDTSNMDHYHRLIWEVW
VPVMRTCVSQWQPRNVGPMVDCVECWAPVLPLWILDNVLDQLIFPRLQREVDNWNPLTDT
VPIHSWIHPWLPLMQTRLEPLYAPIRSKLAHALQRWHPSDSSARLILQPWREVFTPGAWE
AFMVKNIVPKLALCLGELVVNPHQQLLEPFNWVMDWEGMLSVSSMVGLLDKNFFPKWLQV
LCSWLSNNPNYEEITKWYLGWKSLFSENLLSHPLVKEKLNEALDIMNRAVASGLGGYMQP
GARENIAYLIQTERRKDFQCEPLPERREVENSATRPPGTAAVPTAVPTNFKDLVQAKAEE
NGIVFMPLVAKRHMGKQLFTFGRIVIYIERGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccatttgtatgggcgtagaggtgaggaggaggaggaggatggtgtggaa
attgaaaagtttgaggtgactgagtgggacttggccaatgagttcaacccagagagacgc
agacacagacagactaaagaagaagtgacttatgggatttgggcagagcatgactctgat
gatgagcggcccagttttggggggaaaagagcgaaagactattcagctcctgtgaacttt
gtgagtggtggcatacgaaagactgcagctgaggagaaattggagaaggagggttcagat
gattccaatgacagtggagatgtacctcctcctccacctcgcactgcagttcccaaaaag
ctccaaacgggtgggagctttaagacatcccagaggtttgcaggcggtattagaacaggg
caggacctgggatcctgggagaaacacacacgaggcattggtcaaaaacttttgcagaag
atgggttacattccaggaaaaggattgggcaaaaatgctcagggtattgtgaatcctatt
gaagctaagctgcggaaggggaagggagcagttggtgcatatggtaatgagaggacccag
cagtccctgcaggatttccctgttatagactctgaggaagaggaggagcaagaatttcag
agagagttggggcaatggcgtaaagacccgggaacgacaaagaaaaagcccaaatattct
tacaagtctgtggaagagctgaaagctcatggcaaactggccaacaagagcatgagcaga
cctgctggagaacttgctcaggtcaaggtgatcgatatgacgggcagagagcagaaggtg
tatcatagctacagtcatatgagtcagaagcacagtgttcctgaggaggcacctttgagc
gtaaccacgcgagagcagaagagcactggcttcgctctgccggagctggaacataacctc
aagctgctcattgagctcacagagcaagacatcctacagagtgcacggcgtctgcagcat
gagaaggacactgtggtgaccctgacccatgagagtgacgccctgcaggtccggctggca
gaggaggaagagtctcttggtcggctagagcaagtgatgaacctagtggagagctttgaa
gcaggcgatacggagggaggctctgcgctcagccttcaggagtgtgcgaaggtcttccag
cagctgcagacagagttctatcaggaatataagactttgggtttgggagatatagctgtg
tctgttgtgcatcctctattgaaagagaagcttcgcaactgggatccattgaaggactgt
tcagatggtttagaggaagtcggtcaatggagggccattctcgaaagctcacaatctctt
cacggtggaccagacacttctaacatggaccactatcacaggttgatatgggaagtgtgg
gttccagtcatgaggacctgtgtgtcccagtggcagcccagaaatgtggggcccatggtg
gactgcgtagaatgctgggctcctgtattaccgctgtggattctggacaatgttttggat
cagcttatttttccacgactacagcgagaggtggacaactggaacccactgactgacaca
gtgccaatccattcatggattcatccctggctacccctgatgcaaacccgtcttgagccg
ctgtacgcccccatccgcagcaaactagcccatgctttgcaacgctggcaccccagcgac
tcctctgccagactcattctgcaaccctggagggaggtcttcacacctggagcctgggag
gccttcatggtcaaaaatatcgtccccaaactggctctatgtttaggagagctggtggtg
aatcctcatcagcaactgctggagccattcaactgggtgatggactgggaggggatgctc
tcggtctcctctatggttggattgctggataagaatttcttccccaaatggctacaggtg
ttgtgttcctggctcagcaacaacccgaactatgaagagatcactaaatggtatcttggc
tggaagagcttattctcagagaacctgctcagtcacccattggtcaaagaaaaactgaac
gaggcccttgacattatgaaccgtgccgtagcctctggactaggtgggtatatgcaacct
ggagcaagagagaacattgcctatctgattcagacggagagaaggaaagatttccagtgc
gagcctctgcctgagcgccgtgaagtggagaattctgccacacgcccaccaggcaccgca
gcggtaccaacagctgtacctaccaactttaaagatctagtccaggccaaggctgaggag
aacggcatcgtcttcatgccactggtagccaaacggcatatgggaaaacagttgttcaca
ttcggcagaatagtcatctacattgagcgtggagtggtctttgtccaaggtgagaaaacc
tgggttccaacatcactacagagtctaattgacatggccaaatga
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