Pimephales promelas (fathead minnow): 120463136
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Entry
120463136 CDS
T08155
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04110
Cell cycle
pprm04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120463136 (smc1a)
04114 Oocyte meiosis
120463136 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120463136 (smc1a)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120463136 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
120463136 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
120463136
NCBI-ProteinID:
XP_039507921
LinkDB
All DBs
Position
Unknown
AA seq
1232 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYCEDNGDECTFTRVIIGSSSEYRINNKVVGLSDYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVRAHVQLQLFKLYHNEEEIEKLNR
ELSQRNREIEKDRKKMDHVEEELKEKKKELGRMMRDQQNVEKEIKEKDAELNQKRPQYIK
AKENTAHKIKKLEVARKSLQNAQKMYKKRKADIEELDHEQGAVEMARQEFDERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKIETEAK
IKQKIREIEENQKRIEKLEDYIATSRQSLDEQRRMEEELTEEVELAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSRERDITELRDRMNLVEDEVFVDF
CEEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVMMWEQ
TVKKDENEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKGEVNDKNREMEEIRKKLGS
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLKSGTMDDISQGEGSSQVE
DSISSPKASSSVHAKEALIEIDYSNLNEDLKDSLSEDEIKAEMNTLQQRLNEQQSILQRI
SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKSLSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSL
IGVYPEQGDCVISKVLTFDLSQYPDANPNPND
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggatatttaaagctgatcgagatcgaaaatttcaaatcttataaaggacgccaaata
atcggaccatttcacaaatttacagcaataattggaccaaatggatctgggaagtcaaac
ctgatggacgccatcagttttgtattagcagagaagaccagtaacctgcgcgttaaaact
ctgaaggatctcatccatggagcaccagtaggaaaaccagcagccaaccgtgccttcgtg
agcatggtctactgcgaggacaatggagatgaatgcactttcacaagggtcatcattggt
tcctcctcagagtaccgaatcaacaataaggtggtcgggctttcagactacagcgaggaa
cttgagaaactgggtatccttattaaggccagaaattttcttgtgtttcagggtgcagtg
gagtcgatagccatgaagaatcctaaagagaggacggctttgtttgaggagatctcccgc
tctggtgagctggcccaggaatatgaccgcagaaagaaagagatggtgaaagcagaagaa
gacacgcagttcaactatcaccgcaagaagaacatcgcagcagagcgcaaagaggccaaa
caggaaaaagaggaggctgagagataccagagactaaaggatgaggtggtcagggctcac
gttcagctacagctctttaaactctaccataatgaggaggagatcgagaagctgaacaga
gagttgtcccagcgcaaccgtgagattgagaaggacaggaagaagatggaccatgtcgag
gaagagctcaaggaaaagaagaaagagctaggaagaatgatgcgagatcagcagaatgtg
gagaaggagataaaagagaaagatgctgagctgaatcagaaacggccacagtatatcaaa
gccaaggagaacactgcccataaaattaagaagctcgaggtggctcgaaagtctttgcag
aacgcccagaagatgtacaagaagcgtaaggcagacatagaggaactggaccatgagcag
ggcgctgtggagatggcaaggcaggagtttgatgaacggatggaagaggaagcccagagt
caaggccaagatctgacacttgaggagaaccaggtgaagcagtatcacaggctgaaggag
gaggccagtaagcgggcagctaccttggcacaggagctagagaagtttaacagggaccaa
aaggccgaccaggacagactggatctagaggagaggaagaaaattgagacagaggccaaa
ataaagcagaagattcgagagatcgaggaaaaccagaagcgcattgaaaagctggaggac
tatattgcaactagcaggcagtctctggatgaacaaaggcgtatggaagaggaactgact
gaggaagtggagctggccaaaagaaggattgatgagataaacatggagttaaaccaagtg
atggagcaacttggagatgctcgtattgacaggcaagagaacagccgtcagcagcgcaaa
gctgaaattatggagagcattaagcggctttaccccggctcagtgtatggcagactgatt
gacttatgccagcccactcagaagaaataccagattgcagtgaccaaagtcctgggaaaa
aacatggacgccatcattgtggactctgagaaaaccggccgagattgcatccagtacatt
aaagagcaaagaggagaaccggagacctttctgcctctcgactatttggaggtgaaaccc
acagatgagaaactgagagagcttcgtggggcaaagctggtgatcgacgtgatccgctat
gagccaccacacataaagaaagcccttcagtatgcctgcgggaatgctttagtgtgcgag
aatgtggaggacgctcgcaggattgccttcggaggaccataccgtcataagaccgtggcc
ttggatggaactctcttccaaaagtcaggtgtgatctctggaggagctagcgacctgaaa
gcaaaggctcggcgttgggacgagaaggctgtggacaaacttaaggaaaagaaagagaaa
ctaacagaggaattgaaggaacaaatgaaggcaaagagaaaggaggcagagctcagacag
gttcagtctcaggcacacgggctgcagatgagactcaaatactctcagagtgatctggaa
cagaccaaaactcgccacctctctctgaacatgcaggagaaatcaaagttggagagtgag
ctggcaaattttggcccacgaattaatgacataaaacgaatcatccaatcacgagagagg
gacattacagagttacgagatcgcatgaacctggtggaggatgaggtctttgttgatttc
tgtgaggagataggcgtgcgaaatatccgagagtttgaagaggaaaaagtaaagaggcag
aatgagattgccaaaaaacggctggagtttgagacacagaagacccgtctggccatccag
cttgattatgagaagaaccagttgaaggaggaccaggagaaagtgatgatgtgggaacag
actgtaaagaaggatgagaacgagattgaaagacttaaaaaggaggaacacagacatatg
aaaatcattgatgagacaatggcacagctacaggacctgaagaaccagcatctcactaag
aagggagaggtcaatgacaagaaccgagagatggaggagatccgtaagaaactaggctct
gccaacaaagagctgacgcagctgcagaaggaagtaaccgccatcgagaccaaactggaa
cagaaacgcagtgacagacacaacttactgcaagcctgcaagatgcaggacatcaaacta
cccctcaaatcagggacaatggatgacatcagccagggagagggaagctcgcaagttgag
gattcgatcagcagcccgaaggcatcaagttctgtgcatgccaaagaggccctcatagag
attgactacagcaacttaaatgaggacctcaaggattctctgtcagaggatgagatcaag
gcagagatgaacaccctacagcagaggctgaacgagcagcaaagcatcctgcagagaatc
agcgctcccaacatgaaggccatggagaaactcgagagcgttagagacaagttccaggag
accagtgatgagtttgaagctgctcgaaaaagagccaagaaagccaaacaagcattcgag
cagatcaagaaagagcggtttgatcgtttcaatgcctgttttgagtctgttgccaccaac
attgatgagatctacaaatcgctgtcacgtaacagcagtgcacaggcattcctggggcca
gagaacccagaagaaccatacttagatggaatcaactacaactgtgtggctccaggaaag
aggttcaggcccatggataacctgtcaggaggagagaagactgtggctgctttagctctg
ctttttgccattcacagctacaagcctgcacctttctttgtcttggatgagattgatgct
gctttggataataccaacataggcaaggtggccaactacataaaggaccagtcagtccag
aattttcaggccattgttatctctctcaaagaggagttctacacaaaagctgactccctc
ataggagtttaccctgagcaaggagattgtgtcatcagtaaggtgctgacctttgatctt
tcccagtatccagatgccaatcccaatcctaatgattag
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integrated database retrieval system
