Pimephales promelas (fathead minnow): 120463213
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Entry
120463213 CDS
T08155
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
pprm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120463213 (rnps1)
03015 mRNA surveillance pathway
120463213 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120463213 (rnps1)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120463213 (rnps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
RRM_5
KdpD
Motif
Other DBs
NCBI-GeneID:
120463213
NCBI-ProteinID:
XP_039508075
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MAPSPTKRRERSEDKPRERGKEKPAGKEGAEKEKDKERGRDKIRKRRSNSTGSSSSRKEK
RSRSSSSSSSSSGSSSGSSSGSSSSSGSSRSGSSSSSRSSSSSGSSGSPSPGRRRHDNRR
RSRSKSKSQKRTDEKERKRRSPSPKPTKLYLGRLTRNVTKEHIQEIFSTYGKIKMIDMPP
DRLHPNLSKGYAYVEYESPEDAQKALKHMDGGQIDGQEITATAVLPQRIRPPMRRPSPPR
RMPPPPPMWRRTPPRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcaccatcaccaaccaagcgcagggagcgttcagaggacaaacccagggaacgaggg
aaggagaagcctgctgggaaagagggagcggagaaggagaaggataaggagagaggcaga
gacaagatccggaagcggcgcagtaactccaccgggagcagcagcagcaggaaggaaaaa
agatccaggtccagttccagctccagcagcagctctgggtccagttcgggatcgtccagt
gggtccagctcctcttctggttccagccgctccggttcctccagttcctctcgttcctct
agttcatccgggtcctctggctctcccagtccaggccgccgtcgccatgacaaccggcgc
cgctcacggtcaaagtccaaatcacaaaaacggaccgatgagaaagagaggaagaggagg
agcccgagccccaaacccaccaaactttatctgggaagactcaccaggaacgtaaccaag
gaacatattcaggagatcttctcaacgtatggcaagatcaagatgattgacatgcctccc
gaccgtctgcaccctaatttgtcaaagggttacgcttatgtggagtatgagtctccagag
gacgcacagaaagccctgaaacacatggacggaggtcagatcgacggtcaggaaatcacc
gccactgctgtcctgccccagaggattcgcccccccatgagaagaccgtcccccccgcgc
cggatgcctcctccgccgcccatgtggcgccgcacgccgcctcgcatgaggagaaggtct
cgctctcctcggcgacgctccccggtgagaagacgctctcgctccaggtctccgggtcgc
agacgacatcgctcccgctccagttccaactcgtcccgttag
DBGET
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